Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 Y_RNA.135-201ENST00000363439 95 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 Y_RNA.212-201ENST00000364177 102 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 RNU6-336P-201ENST00000364891 107 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 Y_RNA.530-201ENST00000384587 101 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
HMGCLP35914 RNU6-220P-201ENST00000390919 107 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 SNORD37.1-201ENST00000390968 65 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 RNU6-332P-201ENST00000391193 108 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMGCLP35914 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 RNU6-1148P-201ENST00000410992 104 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 AL139156.1-201ENST00000412785 841 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 AC097463.2-201ENST00000421074 142 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 EIF4EP4-201ENST00000424916 578 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 AL365400.1-201ENST00000431854 640 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 NDUFA5P4-201ENST00000436704 385 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGCLP35914 FABP5P14-201ENST00000437273 393 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.03□□□□□ -2.08
HMGCLP35914 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGCLP35914 AL441985.1-201ENST00000457727 251 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 RNA5SP233-201ENST00000459153 113 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 RNA5SP112-201ENST00000515937 99 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 AC087854.1-201ENST00000519706 414 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.03□□□□□ -2.08
HMGCLP35914 PSMA3P-201ENST00000555485 635 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGCLP35914 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.03□□□□□ -2.08
HMGCLP35914 AC068944.2-201ENST00000610373 403 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 U6atac.1-201ENST00000616025 117 ntBASIC2.03□□□□□ -2.08
HMGCLP35914 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.02□□□□□ -2.09
HMGCLP35914 MTND4P1-201ENST00000457501 1466 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMGCLP35914 RNU6-877P-201ENST00000383868 107 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 MIR95-201ENST00000385072 81 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 FGF7P8-201ENST00000402994 292 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU4-26P-201ENST00000410270 107 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU2-2P-201ENST00000410396 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU2-23P-201ENST00000410545 195 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AIMP1P2-201ENST00000425294 312 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 TOMM20P4-201ENST00000427861 435 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 SNAP23P1-201ENST00000433229 246 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMGCLP35914 RBMX2P4-201ENST00000441256 376 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AC243964.1-201ENST00000441814 261 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.02□□□□□ -2.09
HMGCLP35914 AL021397.1-201ENST00000451806 248 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCLP35914 TRBVA-201ENST00000498804 316 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCLP35914 SNORA19.2-201ENST00000516013 114 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU6-358P-201ENST00000516564 75 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCLP35914 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCLP35914 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.02□□□□□ -2.09
HMGCLP35914 MIR4765-201ENST00000585007 77 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AC096772.1-201ENST00000609146 564 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AC013412.1-201ENST00000610687 192 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.15-201ENST00000611544 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.16-201ENST00000613119 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.12-201ENST00000613778 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.20-201ENST00000613956 192 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.9-201ENST00000615427 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.11-201ENST00000616345 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.2-201ENST00000616535 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.3-201ENST00000617785 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.19-201ENST00000618602 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 RNU2-1-201ENST00000618664 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.6-201ENST00000619225 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.5-201ENST00000619465 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 U2.10-201ENST00000620268 191 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 AL162373.1-201ENST00000620433 407 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.02□□□□□ -2.09
HMGCLP35914 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.02□□□□□ -2.09
HMGCLP35914 ZNF355P-201ENST00000427301 3216 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
HMGCLP35914 CENPCP1-201ENST00000533085 2578 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 OR56A5-201ENST00000340110 738 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 RNU6-1285P-201ENST00000363480 105 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 Y_RNA.248-201ENST00000364501 109 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 RNU6-1329P-201ENST00000365664 107 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 RNU2-40P-201ENST00000410833 196 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.01□□□□□ -2.09
HMGCLP35914 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGCLP35914 AC003685.2-201ENST00000422795 395 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 BX276092.3-201ENST00000424182 230 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AL513185.2-201ENST00000425543 193 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 RPL23AP95-201ENST00000426806 265 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AC027124.2-201ENST00000428249 105 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 USP9YP8-201ENST00000441913 500 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AL359672.1-201ENST00000442302 409 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGCLP35914 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGCLP35914 RPL36AP48-201ENST00000485521 314 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AC083904.1-201ENST00000487828 231 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 RPL22P13-201ENST00000493291 347 ntBASIC2.01□□□□□ -2.09
HMGCLP35914 AC069439.1-201ENST00000494739 167 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms