Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RNU1-103P-201ENST00000516502 125 ntBASIC4.18□□□□□ -1.74
LIG1P18858 NDUFB9P3-201ENST00000521269 501 ntBASIC4.18□□□□□ -1.74
LIG1P18858 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.18□□□□□ -1.74
LIG1P18858 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LIG1P18858 MZT1P2-201ENST00000604387 248 ntBASIC4.18□□□□□ -1.74
LIG1P18858 MIR7153-201ENST00000637758 57 ntBASIC4.18□□□□□ -1.74
LIG1P18858 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.18□□□□□ -1.74
LIG1P18858 HAUS6P2-201ENST00000433254 2404 ntBASIC4.18□□□□□ -1.74
LIG1P18858 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.18□□□□□ -1.74
LIG1P18858 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIG1P18858 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIG1P18858 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LIG1P18858 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LIG1P18858 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.17□□□□□ -1.74
LIG1P18858 UBE2WP1-201ENST00000362030 340 ntBASIC4.17□□□□□ -1.74
LIG1P18858 RNA5SP361-201ENST00000362686 118 ntBASIC4.17□□□□□ -1.74
LIG1P18858 Y_RNA.82-201ENST00000363000 102 ntBASIC4.17□□□□□ -1.74
LIG1P18858 Y_RNA.92-201ENST00000363043 102 ntBASIC4.17□□□□□ -1.74
LIG1P18858 RNU6-778P-201ENST00000363269 103 ntBASIC4.17□□□□□ -1.74
LIG1P18858 Y_RNA.235-201ENST00000364412 102 ntBASIC4.17□□□□□ -1.74
LIG1P18858 Y_RNA.306-201ENST00000365015 102 ntBASIC4.17□□□□□ -1.74
LIG1P18858 Y_RNA.312-201ENST00000365089 102 ntBASIC4.17□□□□□ -1.74
LIG1P18858 Y_RNA.322-201ENST00000365151 102 ntBASIC4.17□□□□□ -1.74
LIG1P18858 RNU6-898P-201ENST00000365627 104 ntBASIC4.17□□□□□ -1.74
LIG1P18858 U8.10-201ENST00000384260 133 ntBASIC4.17□□□□□ -1.74
LIG1P18858 U8.11-201ENST00000384699 133 ntBASIC4.17□□□□□ -1.74
LIG1P18858 U8.12-201ENST00000384701 133 ntBASIC4.17□□□□□ -1.74
LIG1P18858 RNU6-21P-201ENST00000384710 107 ntBASIC4.17□□□□□ -1.74
LIG1P18858 MIR184-201ENST00000384962 84 ntBASIC4.17□□□□□ -1.74
LIG1P18858 MIR10B-201ENST00000385011 110 ntBASIC4.17□□□□□ -1.74
LIG1P18858 RNU6-1197P-201ENST00000391183 107 ntBASIC4.17□□□□□ -1.74
LIG1P18858 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.17□□□□□ -1.74
LIG1P18858 RNU4-30P-201ENST00000410245 143 ntBASIC4.17□□□□□ -1.74
LIG1P18858 RPL26P27-201ENST00000414397 437 ntBASIC4.17□□□□□ -1.74
LIG1P18858 AL390729.2-201ENST00000416137 156 ntBASIC4.17□□□□□ -1.74
LIG1P18858 AL606753.1-201ENST00000427435 87 ntBASIC4.17□□□□□ -1.74
LIG1P18858 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.17□□□□□ -1.74
LIG1P18858 Y_RNA.650-201ENST00000459002 102 ntBASIC4.17□□□□□ -1.74
LIG1P18858 U8.18-201ENST00000459285 133 ntBASIC4.17□□□□□ -1.74
LIG1P18858 RPL30P5-201ENST00000494923 336 ntBASIC4.17□□□□□ -1.74
LIG1P18858 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.17□□□□□ -1.74
LIG1P18858 Y_RNA.777-201ENST00000516982 102 ntBASIC4.17□□□□□ -1.74
LIG1P18858 CR383656.8-201ENST00000549046 145 ntBASIC4.17□□□□□ -1.74
LIG1P18858 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.17□□□□□ -1.74
LIG1P18858 Y_RNA.771-201ENST00000598668 102 ntBASIC4.17□□□□□ -1.74
LIG1P18858 RNVU1-4-201ENST00000612985 164 ntBASIC4.17□□□□□ -1.74
LIG1P18858 AC005296.1-201ENST00000616145 209 ntBASIC4.17□□□□□ -1.74
LIG1P18858 Y_RNA.789-201ENST00000622480 102 ntBASIC4.17□□□□□ -1.74
LIG1P18858 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LIG1P18858 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
LIG1P18858 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LIG1P18858 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.17□□□□□ -1.74
LIG1P18858 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LIG1P18858 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.16□□□□□ -1.74
LIG1P18858 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LIG1P18858 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LIG1P18858 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
LIG1P18858 Y_RNA.230-201ENST00000364348 109 ntBASIC4.16□□□□□ -1.74
LIG1P18858 RNY1P5-201ENST00000383890 115 ntBASIC4.16□□□□□ -1.74
LIG1P18858 RNU6-658P-201ENST00000384606 106 ntBASIC4.16□□□□□ -1.74
LIG1P18858 Y_RNA.570-201ENST00000384750 101 ntBASIC4.16□□□□□ -1.74
LIG1P18858 MIR325-201ENST00000385260 98 ntBASIC4.16□□□□□ -1.74
LIG1P18858 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LIG1P18858 SNORA48.7-201ENST00000391302 135 ntBASIC4.16□□□□□ -1.74
LIG1P18858 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.16□□□□□ -1.74
LIG1P18858 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.16□□□□□ -1.74
LIG1P18858 TMSB4XP3-201ENST00000445144 114 ntBASIC4.16□□□□□ -1.74
LIG1P18858 AC109925.1-201ENST00000478069 331 ntBASIC4.16□□□□□ -1.74
LIG1P18858 AC097462.2-201ENST00000504623 481 ntBASIC4.16□□□□□ -1.74
LIG1P18858 AC074198.2-201ENST00000508153 258 ntBASIC4.16□□□□□ -1.74
LIG1P18858 PHBP14-201ENST00000512887 367 ntBASIC4.16□□□□□ -1.74
LIG1P18858 RNU7-110P-201ENST00000516891 62 ntBASIC4.16□□□□□ -1.74
LIG1P18858 H3F3AP1-201ENST00000559984 334 ntBASIC4.16□□□□□ -1.74
LIG1P18858 RMST_8.1-201ENST00000610287 165 ntBASIC4.16□□□□□ -1.74
LIG1P18858 AL590240.4-201ENST00000616908 390 ntBASIC4.16□□□□□ -1.74
LIG1P18858 SNORA43.4-201ENST00000629559 138 ntBASIC4.16□□□□□ -1.74
LIG1P18858 U6.106-201ENST00000636360 105 ntBASIC4.16□□□□□ -1.74
LIG1P18858 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.16□□□□□ -1.74
LIG1P18858 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LIG1P18858 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.16□□□□□ -1.74
LIG1P18858 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.15□□□□□ -1.74
LIG1P18858 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LIG1P18858 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
LIG1P18858 SRP72P2-201ENST00000344851 1979 ntBASIC4.15□□□□□ -1.74
LIG1P18858 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LIG1P18858 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
LIG1P18858 RNU6-47P-201ENST00000383866 107 ntBASIC4.15□□□□□ -1.75
LIG1P18858 RNU6-1145P-201ENST00000384246 107 ntBASIC4.15□□□□□ -1.75
LIG1P18858 MIR329-1-201ENST00000385028 80 ntBASIC4.15□□□□□ -1.75
LIG1P18858 RNU6-159P-201ENST00000391080 106 ntBASIC4.15□□□□□ -1.75
LIG1P18858 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.15□□□□□ -1.75
LIG1P18858 RNU2-61P-201ENST00000411069 191 ntBASIC4.15□□□□□ -1.75
LIG1P18858 WARS2P1-201ENST00000429678 537 ntBASIC4.15□□□□□ -1.75
LIG1P18858 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.15□□□□□ -1.75
LIG1P18858 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.15□□□□□ -1.75
LIG1P18858 AP002884.2-201ENST00000471647 395 ntBASIC4.15□□□□□ -1.75
LIG1P18858 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.15□□□□□ -1.75
LIG1P18858 RNU6-567P-201ENST00000516746 107 ntBASIC4.15□□□□□ -1.75
LIG1P18858 RNU6-1198P-201ENST00000516904 67 ntBASIC4.15□□□□□ -1.75
LIG1P18858 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms