Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SFTPBP07988 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SFTPBP07988 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SFTPBP07988 Y_RNA.41-201ENST00000362646 102 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 RNU6-82P-201ENST00000363970 107 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 Y_RNA.517-201ENST00000384551 106 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 MIR518A2-201ENST00000384966 87 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 BTF3L4P2-201ENST00000392798 346 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.96□□□□□ -2.1
SFTPBP07988 IPO7P1-201ENST00000442031 636 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 MTND3P16-201ENST00000452205 344 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 RPL21P99-201ENST00000480369 423 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.96□□□□□ -2.1
SFTPBP07988 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SFTPBP07988 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.96□□□□□ -2.1
SFTPBP07988 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.96□□□□□ -2.1
SFTPBP07988 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.96□□□□□ -2.1
SFTPBP07988 RNU6-323P-201ENST00000521915 107 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 AP005597.4-201ENST00000526762 229 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 AP000889.2-201ENST00000532684 490 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.96□□□□□ -2.1
SFTPBP07988 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.96□□□□□ -2.1
SFTPBP07988 AC009314.1-201ENST00000603871 304 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 AP001836.1-201ENST00000604675 523 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 AC092954.2-201ENST00000609103 430 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 AC092807.2-201ENST00000609367 243 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 AC068944.2-201ENST00000610373 403 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 AL121757.2-201ENST00000611223 313 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SFTPBP07988 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.96□□□□□ -2.1
SFTPBP07988 AC103705.1-201ENST00000619013 241 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 MIR1248-201ENST00000629190 106 ntBASIC1.96□□□□□ -2.1
SFTPBP07988 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SFTPBP07988 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.95□□□□□ -2.1
SFTPBP07988 Y_RNA.372-201ENST00000365599 102 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 SNORA46.1-201ENST00000391069 153 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 SNORA3.2-201ENST00000408221 125 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 RNU6-1068P-201ENST00000410958 103 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.95□□□□□ -2.1
SFTPBP07988 AL356320.1-201ENST00000429616 163 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.95□□□□□ -2.1
SFTPBP07988 PSPHP1-201ENST00000450062 261 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.95□□□□□ -2.1
SFTPBP07988 AC019235.1-201ENST00000503847 207 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 AC022447.4-201ENST00000504053 364 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 AC105313.1-201ENST00000509121 353 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.95□□□□□ -2.1
SFTPBP07988 RNU1-41P-201ENST00000516161 162 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 RNU1-48P-201ENST00000516400 162 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 AC104576.1-201ENST00000524225 88 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 AC025423.5-201ENST00000550230 219 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 TRAV32-201ENST00000553993 340 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 AC245505.1-201ENST00000556398 224 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.95□□□□□ -2.1
SFTPBP07988 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.95□□□□□ -2.1
SFTPBP07988 MIR5007-201ENST00000583098 95 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 MIR3136-201ENST00000583498 78 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.95□□□□□ -2.1
SFTPBP07988 AL158827.2-201ENST00000602494 330 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 AL357078.3-201ENST00000607528 618 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 MIR6766-201ENST00000622641 72 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 AL691447.3-201ENST00000635020 330 ntBASIC1.95□□□□□ -2.1
SFTPBP07988 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SFTPBP07988 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SFTPBP07988 RNA5SP276-201ENST00000362580 94 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 Y_RNA.504-201ENST00000384481 104 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 RN7SKP61-201ENST00000410642 295 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 RNA5SP450-201ENST00000411206 102 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 Z98742.3-201ENST00000418637 326 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 RPL23AP95-201ENST00000426806 265 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 TIMM9P3-201ENST00000428659 274 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 CBX3P6-201ENST00000430257 527 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 AC018634.1-201ENST00000437554 401 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.94□□□□□ -2.1
SFTPBP07988 MTND1P1-201ENST00000445453 368 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.94□□□□□ -2.1
SFTPBP07988 Y_RNA.654-201ENST00000497848 106 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 PTP4A1P4-201ENST00000512479 322 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 RNU6-991P-201ENST00000516168 107 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 RNA5SP281-201ENST00000516504 135 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 RNU6-1069P-201ENST00000516612 133 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 IGKV3-31-201ENST00000523109 329 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.94□□□□□ -2.1
SFTPBP07988 AK6P1-201ENST00000540219 478 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 AC007375.1-201ENST00000554513 578 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.94□□□□□ -2.1
SFTPBP07988 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.94□□□□□ -2.1
SFTPBP07988 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.94□□□□□ -2.1
SFTPBP07988 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
SFTPBP07988 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SFTPBP07988 AP000560.1-201ENST00000624150 1937 ntBASIC1.93□□□□□ -2.1
SFTPBP07988 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SFTPBP07988 RNU6-1159P-201ENST00000362933 107 ntBASIC1.93□□□□□ -2.1
SFTPBP07988 RNU6-142P-201ENST00000384019 107 ntBASIC1.93□□□□□ -2.1
SFTPBP07988 RNU6-483P-201ENST00000384088 108 ntBASIC1.93□□□□□ -2.1
SFTPBP07988 SNORA36A-201ENST00000384221 132 ntBASIC1.93□□□□□ -2.1
SFTPBP07988 MIR514A2-201ENST00000385131 88 ntBASIC1.93□□□□□ -2.1
SFTPBP07988 MIR514A3-201ENST00000385132 88 ntBASIC1.93□□□□□ -2.1
SFTPBP07988 MIR1294-201ENST00000408503 142 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms