Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
MBD3O95983 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MBD3O95983 RNU4-15P-201ENST00000362613 141 ntBASIC1.78□□□□□ -2.12
MBD3O95983 Y_RNA.159-201ENST00000363674 87 ntBASIC1.78□□□□□ -2.12
MBD3O95983 RNU6-43P-201ENST00000384302 107 ntBASIC1.78□□□□□ -2.12
MBD3O95983 SNORA26.3-201ENST00000391119 136 ntBASIC1.78□□□□□ -2.12
MBD3O95983 RN7SKP192-201ENST00000411291 327 ntBASIC1.78□□□□□ -2.12
MBD3O95983 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.78□□□□□ -2.12
MBD3O95983 RPL23AP95-201ENST00000426806 265 ntBASIC1.78□□□□□ -2.12
MBD3O95983 HMGN2P3-201ENST00000433603 273 ntBASIC1.78□□□□□ -2.12
MBD3O95983 HMGN2P5-201ENST00000436882 273 ntBASIC1.78□□□□□ -2.12
MBD3O95983 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.78□□□□□ -2.12
MBD3O95983 USP9YP29-201ENST00000445112 563 ntBASIC1.78□□□□□ -2.12
MBD3O95983 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.78□□□□□ -2.12
MBD3O95983 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.78□□□□□ -2.12
MBD3O95983 TRBV12-1-201ENST00000479785 344 ntBASIC1.78□□□□□ -2.12
MBD3O95983 FO393415.2-201ENST00000480085 343 ntBASIC1.78□□□□□ -2.12
MBD3O95983 AC023790.1-201ENST00000482174 347 ntBASIC1.78□□□□□ -2.12
MBD3O95983 AC093259.1-201ENST00000509755 300 ntBASIC1.78□□□□□ -2.12
MBD3O95983 AC010493.1-201ENST00000513479 292 ntBASIC1.78□□□□□ -2.12
MBD3O95983 Y_RNA.695-201ENST00000516715 107 ntBASIC1.78□□□□□ -2.12
MBD3O95983 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.78□□□□□ -2.12
MBD3O95983 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.78□□□□□ -2.12
MBD3O95983 AC087441.2-201ENST00000529141 262 ntBASIC1.78□□□□□ -2.12
MBD3O95983 AC022880.1-201ENST00000534017 973 ntBASIC1.78□□□□□ -2.12
MBD3O95983 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.78□□□□□ -2.12
MBD3O95983 AC022254.1-201ENST00000567857 235 ntBASIC1.78□□□□□ -2.12
MBD3O95983 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.78□□□□□ -2.12
MBD3O95983 Z99497.2-201ENST00000603634 310 ntBASIC1.78□□□□□ -2.12
MBD3O95983 AC063943.3-201ENST00000615562 356 ntBASIC1.78□□□□□ -2.12
MBD3O95983 MIR1248-201ENST00000629190 106 ntBASIC1.78□□□□□ -2.12
MBD3O95983 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.78□□□□□ -2.12
MBD3O95983 MTND5P10-201ENST00000603719 1809 ntBASIC1.77□□□□□ -2.13
MBD3O95983 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
MBD3O95983 AC092268.1-201ENST00000342691 405 ntBASIC1.77□□□□□ -2.13
MBD3O95983 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
MBD3O95983 SNORD32A-201ENST00000364805 84 ntBASIC1.77□□□□□ -2.13
MBD3O95983 BTF3L4P2-201ENST00000392798 346 ntBASIC1.77□□□□□ -2.13
MBD3O95983 MTCYBP2-201ENST00000407745 171 ntBASIC1.77□□□□□ -2.13
MBD3O95983 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.77□□□□□ -2.13
MBD3O95983 AC007098.1-201ENST00000420122 367 ntBASIC1.77□□□□□ -2.13
MBD3O95983 OOSP1P1-201ENST00000423265 274 ntBASIC1.77□□□□□ -2.13
MBD3O95983 AC010975.2-201ENST00000427781 588 ntBASIC1.77□□□□□ -2.13
MBD3O95983 AL133396.1-201ENST00000432048 687 ntBASIC1.77□□□□□ -2.13
MBD3O95983 SNAP23P1-201ENST00000433229 246 ntBASIC1.77□□□□□ -2.13
MBD3O95983 AC244670.1-201ENST00000436879 112 ntBASIC1.77□□□□□ -2.13
MBD3O95983 HSPE1P21-201ENST00000438283 308 ntBASIC1.77□□□□□ -2.13
MBD3O95983 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
MBD3O95983 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.77□□□□□ -2.13
MBD3O95983 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.77□□□□□ -2.13
MBD3O95983 RNU6-965P-201ENST00000516721 96 ntBASIC1.77□□□□□ -2.13
MBD3O95983 RNU6-250P-201ENST00000516958 103 ntBASIC1.77□□□□□ -2.13
MBD3O95983 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.77□□□□□ -2.13
MBD3O95983 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.77□□□□□ -2.13
MBD3O95983 AL356057.1-201ENST00000533798 831 ntBASIC1.77□□□□□ -2.13
MBD3O95983 AP000873.5-201ENST00000533906 236 ntBASIC1.77□□□□□ -2.13
MBD3O95983 TRAV32-201ENST00000553993 340 ntBASIC1.77□□□□□ -2.13
MBD3O95983 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.77□□□□□ -2.13
MBD3O95983 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.77□□□□□ -2.13
MBD3O95983 AC123912.5-201ENST00000605470 343 ntBASIC1.77□□□□□ -2.13
MBD3O95983 AL022345.1-201ENST00000607292 135 ntBASIC1.77□□□□□ -2.13
MBD3O95983 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.77□□□□□ -2.13
MBD3O95983 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.77□□□□□ -2.13
MBD3O95983 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.77□□□□□ -2.13
MBD3O95983 AC097372.5-201ENST00000623665 376 ntBASIC1.77□□□□□ -2.13
MBD3O95983 SNORD98-201ENST00000636377 67 ntBASIC1.77□□□□□ -2.13
MBD3O95983 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.77□□□□□ -2.13
MBD3O95983 RNU6-552P-201ENST00000362869 119 ntBASIC1.76□□□□□ -2.13
MBD3O95983 RNU6-266P-201ENST00000364225 107 ntBASIC1.76□□□□□ -2.13
MBD3O95983 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MBD3O95983 SNORA75-201ENST00000384158 137 ntBASIC1.76□□□□□ -2.13
MBD3O95983 RNU11-3P-201ENST00000391111 133 ntBASIC1.76□□□□□ -2.13
MBD3O95983 AL357139.1-201ENST00000407792 426 ntBASIC1.76□□□□□ -2.13
MBD3O95983 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.76□□□□□ -2.13
MBD3O95983 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.76□□□□□ -2.13
MBD3O95983 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.76□□□□□ -2.13
MBD3O95983 AC098826.2-201ENST00000452011 651 ntBASIC1.76□□□□□ -2.13
MBD3O95983 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MBD3O95983 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.76□□□□□ -2.13
MBD3O95983 BNIP3P25-201ENST00000596023 559 ntBASIC1.76□□□□□ -2.13
MBD3O95983 CYP2C61P-201ENST00000604072 290 ntBASIC1.76□□□□□ -2.13
MBD3O95983 AC002044.1-201ENST00000606707 158 ntBASIC1.76□□□□□ -2.13
MBD3O95983 AC241585.2-209ENST00000638217 143 ntBASIC1.76□□□□□ -2.13
MBD3O95983 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
MBD3O95983 RNU6-428P-201ENST00000362942 107 ntBASIC1.75□□□□□ -2.13
MBD3O95983 RNU4-56P-201ENST00000364700 142 ntBASIC1.75□□□□□ -2.13
MBD3O95983 SNORA70B-201ENST00000384210 135 ntBASIC1.75□□□□□ -2.13
MBD3O95983 RNU6-692P-201ENST00000384496 107 ntBASIC1.75□□□□□ -2.13
MBD3O95983 RNU2-9P-201ENST00000410194 145 ntBASIC1.75□□□□□ -2.13
MBD3O95983 AC009310.1-201ENST00000414414 451 ntBASIC1.75□□□□□ -2.13
MBD3O95983 AL358934.1-201ENST00000432346 324 ntBASIC1.75□□□□□ -2.13
MBD3O95983 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.75□□□□□ -2.13
MBD3O95983 RNA5SP57-201ENST00000459463 123 ntBASIC1.75□□□□□ -2.13
MBD3O95983 RN7SL429P-201ENST00000479090 223 ntBASIC1.75□□□□□ -2.13
MBD3O95983 RN7SL489P-201ENST00000486185 223 ntBASIC1.75□□□□□ -2.13
MBD3O95983 RN7SL327P-201ENST00000488659 223 ntBASIC1.75□□□□□ -2.13
MBD3O95983 HMGB1P29-201ENST00000505659 499 ntBASIC1.75□□□□□ -2.13
MBD3O95983 AC096745.1-201ENST00000509945 370 ntBASIC1.75□□□□□ -2.13
MBD3O95983 Y_RNA.675-201ENST00000516389 149 ntBASIC1.75□□□□□ -2.13
MBD3O95983 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms