Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNU6-944P-201ENST00000364023 107 ntBASIC2.2□□□□□ -2.06
SIX3O95343 RNU6-1141P-201ENST00000364520 107 ntBASIC2.2□□□□□ -2.06
SIX3O95343 Y_RNA.436-201ENST00000384097 102 ntBASIC2.2□□□□□ -2.06
SIX3O95343 RNU6-43P-201ENST00000384302 107 ntBASIC2.2□□□□□ -2.06
SIX3O95343 RN7SKP223-201ENST00000410582 62 ntBASIC2.2□□□□□ -2.06
SIX3O95343 AL139415.2-201ENST00000431968 163 ntBASIC2.2□□□□□ -2.06
SIX3O95343 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.2□□□□□ -2.06
SIX3O95343 MTND1P1-201ENST00000445453 368 ntBASIC2.2□□□□□ -2.06
SIX3O95343 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.2□□□□□ -2.06
SIX3O95343 AC013470.1-201ENST00000453438 462 ntBASIC2.2□□□□□ -2.06
SIX3O95343 CCDC34P1-201ENST00000507441 517 ntBASIC2.2□□□□□ -2.06
SIX3O95343 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SIX3O95343 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.2□□□□□ -2.06
SIX3O95343 SNORA14.1-201ENST00000516113 141 ntBASIC2.2□□□□□ -2.06
SIX3O95343 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.2□□□□□ -2.06
SIX3O95343 CENPUP1-201ENST00000526649 1202 ntBASIC2.2□□□□□ -2.06
SIX3O95343 AC022616.8-201ENST00000533569 253 ntBASIC2.2□□□□□ -2.06
SIX3O95343 AC090115.3-201ENST00000553218 849 ntBASIC2.2□□□□□ -2.06
SIX3O95343 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.2□□□□□ -2.06
SIX3O95343 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.2□□□□□ -2.06
SIX3O95343 MIR3136-201ENST00000583498 78 ntBASIC2.2□□□□□ -2.06
SIX3O95343 AC023043.2-201ENST00000589678 1026 ntBASIC2.2□□□□□ -2.06
SIX3O95343 AC012557.2-201ENST00000605919 418 ntBASIC2.2□□□□□ -2.06
SIX3O95343 MIR6895-201ENST00000613497 78 ntBASIC2.2□□□□□ -2.06
SIX3O95343 AL359880.1-201ENST00000621879 266 ntBASIC2.2□□□□□ -2.06
SIX3O95343 YWHAEP7-203ENST00000622054 312 ntBASIC2.2□□□□□ -2.06
SIX3O95343 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.2□□□□□ -2.06
SIX3O95343 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SIX3O95343 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SIX3O95343 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
SIX3O95343 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SIX3O95343 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.19□□□□□ -2.06
SIX3O95343 MIR337-201ENST00000362281 93 ntBASIC2.19□□□□□ -2.06
SIX3O95343 RNA5SP289-201ENST00000362332 137 ntBASIC2.19□□□□□ -2.06
SIX3O95343 Y_RNA.504-201ENST00000384481 104 ntBASIC2.19□□□□□ -2.06
SIX3O95343 ARL5AP1-201ENST00000418991 388 ntBASIC2.19□□□□□ -2.06
SIX3O95343 AC016907.1-201ENST00000419483 435 ntBASIC2.19□□□□□ -2.06
SIX3O95343 USP9YP18-201ENST00000425912 695 ntBASIC2.19□□□□□ -2.06
SIX3O95343 TIMM9P3-201ENST00000428659 274 ntBASIC2.19□□□□□ -2.06
SIX3O95343 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.19□□□□□ -2.06
SIX3O95343 AC104435.1-201ENST00000483483 166 ntBASIC2.19□□□□□ -2.06
SIX3O95343 HMGB1P35-201ENST00000503360 598 ntBASIC2.19□□□□□ -2.06
SIX3O95343 AC022447.4-201ENST00000504053 364 ntBASIC2.19□□□□□ -2.06
SIX3O95343 AC009646.1-201ENST00000510455 318 ntBASIC2.19□□□□□ -2.06
SIX3O95343 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.19□□□□□ -2.06
SIX3O95343 RNU6-314P-201ENST00000516574 104 ntBASIC2.19□□□□□ -2.06
SIX3O95343 RNA5SP137-201ENST00000516833 135 ntBASIC2.19□□□□□ -2.06
SIX3O95343 RNA5SP480-201ENST00000516840 109 ntBASIC2.19□□□□□ -2.06
SIX3O95343 HSPE1P18-201ENST00000517602 280 ntBASIC2.19□□□□□ -2.06
SIX3O95343 AC087854.1-201ENST00000519706 414 ntBASIC2.19□□□□□ -2.06
SIX3O95343 COPS8P3-201ENST00000526024 482 ntBASIC2.19□□□□□ -2.06
SIX3O95343 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.19□□□□□ -2.06
SIX3O95343 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.19□□□□□ -2.06
SIX3O95343 MIR4287-201ENST00000579398 78 ntBASIC2.19□□□□□ -2.06
SIX3O95343 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.19□□□□□ -2.06
SIX3O95343 AC080013.6-201ENST00000606185 215 ntBASIC2.19□□□□□ -2.06
SIX3O95343 AC068792.1-201ENST00000621354 417 ntBASIC2.19□□□□□ -2.06
SIX3O95343 CTSLP2-204ENST00000629029 392 ntBASIC2.19□□□□□ -2.06
SIX3O95343 AC080100.1-201ENST00000624239 5356 ntBASIC2.19□□□□□ -2.06
SIX3O95343 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SIX3O95343 MIRLET7G-201ENST00000362280 84 ntBASIC2.18□□□□□ -2.06
SIX3O95343 SNORD114-1-201ENST00000362705 72 ntBASIC2.18□□□□□ -2.06
SIX3O95343 SNORD73A-201ENST00000386062 65 ntBASIC2.18□□□□□ -2.06
SIX3O95343 SNORA40.19-201ENST00000390846 128 ntBASIC2.18□□□□□ -2.06
SIX3O95343 MIR1294-201ENST00000408503 142 ntBASIC2.18□□□□□ -2.06
SIX3O95343 MTCO3P41-201ENST00000414801 328 ntBASIC2.18□□□□□ -2.06
SIX3O95343 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.18□□□□□ -2.06
SIX3O95343 SEPT14P3-201ENST00000439401 183 ntBASIC2.18□□□□□ -2.06
SIX3O95343 AL732372.2-207ENST00000445840 183 ntBASIC2.18□□□□□ -2.06
SIX3O95343 AL353705.4-201ENST00000449661 238 ntBASIC2.18□□□□□ -2.06
SIX3O95343 SEPT14P2-201ENST00000453405 183 ntBASIC2.18□□□□□ -2.06
SIX3O95343 AC087884.1-201ENST00000469738 328 ntBASIC2.18□□□□□ -2.06
SIX3O95343 AC018868.1-201ENST00000491307 315 ntBASIC2.18□□□□□ -2.06
SIX3O95343 AC016632.1-201ENST00000503994 196 ntBASIC2.18□□□□□ -2.06
SIX3O95343 SEPT14P4-201ENST00000513445 186 ntBASIC2.18□□□□□ -2.06
SIX3O95343 SNORA19.2-201ENST00000516013 114 ntBASIC2.18□□□□□ -2.06
SIX3O95343 RNA5SP82-201ENST00000516707 92 ntBASIC2.18□□□□□ -2.06
SIX3O95343 FO082796.1-201ENST00000523795 183 ntBASIC2.18□□□□□ -2.06
SIX3O95343 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.18□□□□□ -2.06
SIX3O95343 AC025423.5-201ENST00000550230 219 ntBASIC2.18□□□□□ -2.06
SIX3O95343 TRAV32-201ENST00000553993 340 ntBASIC2.18□□□□□ -2.06
SIX3O95343 VN1R107P-201ENST00000601784 209 ntBASIC2.18□□□□□ -2.06
SIX3O95343 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.18□□□□□ -2.06
SIX3O95343 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SIX3O95343 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.17□□□□□ -2.06
SIX3O95343 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.17□□□□□ -2.06
SIX3O95343 RNU6-82P-201ENST00000363970 107 ntBASIC2.17□□□□□ -2.06
SIX3O95343 RNU4-24P-201ENST00000364565 139 ntBASIC2.17□□□□□ -2.06
SIX3O95343 RNU6-611P-201ENST00000384276 104 ntBASIC2.17□□□□□ -2.06
SIX3O95343 MIR221-201ENST00000385135 110 ntBASIC2.17□□□□□ -2.06
SIX3O95343 CALM2P3-201ENST00000400429 449 ntBASIC2.17□□□□□ -2.06
SIX3O95343 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.17□□□□□ -2.06
SIX3O95343 CBX3P6-201ENST00000430257 527 ntBASIC2.17□□□□□ -2.06
SIX3O95343 MTCO2P7-201ENST00000446518 666 ntBASIC2.17□□□□□ -2.06
SIX3O95343 AC145146.1-201ENST00000496370 254 ntBASIC2.17□□□□□ -2.06
SIX3O95343 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.17□□□□□ -2.06
SIX3O95343 AC091885.1-201ENST00000506658 268 ntBASIC2.17□□□□□ -2.06
SIX3O95343 RNU6-1281P-201ENST00000516223 105 ntBASIC2.17□□□□□ -2.06
SIX3O95343 RNA5SP281-201ENST00000516504 135 ntBASIC2.17□□□□□ -2.06
SIX3O95343 Y_RNA.693-201ENST00000516641 110 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms