Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
SEMA3DO95025 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.43□□□□□ -2.18
SEMA3DO95025 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SEMA3DO95025 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.43□□□□□ -2.18
SEMA3DO95025 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SEMA3DO95025 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
SEMA3DO95025 RNU6-428P-201ENST00000362942 107 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 RNU6-181P-201ENST00000363225 107 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 RNU6-1222P-201ENST00000384615 107 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 SNORA67.6-201ENST00000391093 99 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 SNORA12-201ENST00000391162 147 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 MIR1323-201ENST00000408090 73 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 RNU6-293P-201ENST00000411259 106 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 SRIP3-201ENST00000413200 219 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 AC244505.5-201ENST00000443639 207 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.42□□□□□ -2.18
SEMA3DO95025 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.42□□□□□ -2.18
SEMA3DO95025 SNORD13-201ENST00000459299 104 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 RNA5SP57-201ENST00000459463 123 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 MTCO2P6-201ENST00000463134 685 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 AC023790.1-201ENST00000482174 347 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.42□□□□□ -2.18
SEMA3DO95025 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.42□□□□□ -2.18
SEMA3DO95025 RNU6-445P-201ENST00000516949 107 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.42□□□□□ -2.18
SEMA3DO95025 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.42□□□□□ -2.18
SEMA3DO95025 AC015712.3-201ENST00000559380 164 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.42□□□□□ -2.18
SEMA3DO95025 U1.36-201ENST00000620684 176 ntBASIC1.42□□□□□ -2.18
SEMA3DO95025 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.42□□□□□ -2.18
SEMA3DO95025 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
SEMA3DO95025 RNU6-1285P-201ENST00000363480 105 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 RNU4-48P-201ENST00000365559 182 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
SEMA3DO95025 RNU6-692P-201ENST00000384496 107 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 SNORD70.1-201ENST00000391007 85 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 RNA5SP465-201ENST00000391195 109 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 RNU2-9P-201ENST00000410194 145 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 RNA5SP501-201ENST00000410990 112 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.41□□□□□ -2.18
SEMA3DO95025 MTCO2P34-201ENST00000421994 607 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 AL513185.2-201ENST00000425543 193 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 AC133104.1-201ENST00000429100 218 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 AL591806.2-201ENST00000433122 173 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 MTND1P18-201ENST00000448191 573 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.41□□□□□ -2.18
SEMA3DO95025 AC245102.2-201ENST00000448956 180 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.41□□□□□ -2.18
SEMA3DO95025 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.41□□□□□ -2.18
SEMA3DO95025 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.41□□□□□ -2.18
SEMA3DO95025 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.41□□□□□ -2.18
SEMA3DO95025 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SEMA3DO95025 AC023050.3-201ENST00000541142 333 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.41□□□□□ -2.18
SEMA3DO95025 AC145350.1-201ENST00000567426 208 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 MIR4703-201ENST00000577728 79 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 Z94722.1-201ENST00000604328 474 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.41□□□□□ -2.18
SEMA3DO95025 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
SEMA3DO95025 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SEMA3DO95025 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 RNU1-58P-201ENST00000362413 163 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 RNU4-15P-201ENST00000362613 141 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 RNU6-336P-201ENST00000364891 107 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 RNU6-393P-201ENST00000384475 107 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 SNORA16.2-201ENST00000390991 127 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 RNU4-46P-201ENST00000410818 138 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 RNU6-1245P-201ENST00000411130 106 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.4□□□□□ -2.19
SEMA3DO95025 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.4□□□□□ -2.19
SEMA3DO95025 AL590556.1-201ENST00000423231 483 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 MTCO3P46-201ENST00000425787 232 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 CBX3P6-201ENST00000430257 527 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 AL358934.1-201ENST00000432346 324 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 PRPS1P1-201ENST00000445305 876 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.4□□□□□ -2.19
SEMA3DO95025 AC112492.4-201ENST00000456549 352 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 MTND3P5-201ENST00000512798 333 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 RNU2-69P-201ENST00000516061 100 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.4□□□□□ -2.19
SEMA3DO95025 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.4□□□□□ -2.19
SEMA3DO95025 AC107304.1-201ENST00000604229 296 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 PRR13P7-201ENST00000605538 430 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 AC025754.2-201ENST00000606491 432 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 AL022345.1-201ENST00000607292 135 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 AC022418.1-201ENST00000624118 445 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.4□□□□□ -2.19
SEMA3DO95025 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SEMA3DO95025 RNU1-62P-201ENST00000362599 164 ntBASIC1.39□□□□□ -2.19
SEMA3DO95025 RNU4-91P-201ENST00000364778 135 ntBASIC1.39□□□□□ -2.19
SEMA3DO95025 RNU6-60P-201ENST00000364792 103 ntBASIC1.39□□□□□ -2.19
SEMA3DO95025 RNU6-338P-201ENST00000383888 105 ntBASIC1.39□□□□□ -2.19
SEMA3DO95025 RNU6-1127P-201ENST00000384580 107 ntBASIC1.39□□□□□ -2.19
SEMA3DO95025 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
SEMA3DO95025 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.39□□□□□ -2.19
SEMA3DO95025 PIGFP2-201ENST00000421400 651 ntBASIC1.39□□□□□ -2.19
SEMA3DO95025 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.39□□□□□ -2.19
SEMA3DO95025 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms