Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SEPT14P19-203ENST00000633205 211 ntBASIC1.19□□□□□ -2.22
UPK1BO75841 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.19□□□□□ -2.22
UPK1BO75841 U8.1-201ENST00000362843 134 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 U3.4-201ENST00000363352 213 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 RNU6-414P-201ENST00000363705 104 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 MIR517C-201ENST00000385103 95 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 HMGN1P14-201ENST00000412459 517 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK1BO75841 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
UPK1BO75841 AL354695.1-201ENST00000427935 228 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK1BO75841 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK1BO75841 PRPS1P1-201ENST00000445305 876 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 RPS27AP8-201ENST00000452665 445 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK1BO75841 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK1BO75841 RNU6-415P-201ENST00000516252 97 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 AP001372.4-201ENST00000524889 472 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 AK6P1-201ENST00000540219 478 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.18□□□□□ -2.22
UPK1BO75841 AC103996.1-201ENST00000555468 102 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 AC008015.1-201ENST00000555505 465 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 SNORA77B-201ENST00000578179 125 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 SNORA59B-202ENST00000578183 701 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 AC078795.3-201ENST00000602913 472 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 AC008945.2-201ENST00000606056 604 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 AC002044.1-201ENST00000606707 158 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 AC024933.1-201ENST00000608472 348 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 AC136475.10-201ENST00000620253 385 ntBASIC1.18□□□□□ -2.22
UPK1BO75841 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.18□□□□□ -2.22
UPK1BO75841 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
UPK1BO75841 RNU6-553P-201ENST00000364047 96 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 SNORA32.2-201ENST00000384049 122 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 RNU6-393P-201ENST00000384475 107 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 SNORD70.1-201ENST00000391007 85 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 RNU1-78P-201ENST00000391248 165 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 SNORA3.2-201ENST00000408221 125 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 MIR1267-201ENST00000408723 78 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 RNA5SP201-201ENST00000410316 124 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 MTND3P17-201ENST00000416968 344 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.17□□□□□ -2.22
UPK1BO75841 MTCO1P44-201ENST00000441935 243 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 SNRPGP13-201ENST00000442212 177 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.17□□□□□ -2.22
UPK1BO75841 AC013470.1-201ENST00000453438 462 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 TOMM22P6-201ENST00000465035 409 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.17□□□□□ -2.22
UPK1BO75841 HMGN1P13-201ENST00000505795 138 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.17□□□□□ -2.22
UPK1BO75841 AC091874.1-201ENST00000511402 339 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 RNU2-69P-201ENST00000516061 100 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 SNORD27.1-201ENST00000516319 72 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 RNU6-1098P-201ENST00000516772 96 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 SUMO2P18-201ENST00000518873 252 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.17□□□□□ -2.22
UPK1BO75841 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.17□□□□□ -2.22
UPK1BO75841 AC021231.3-201ENST00000558497 370 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 HMGB1P33-201ENST00000563485 527 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 AC109446.2-201ENST00000567872 497 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 MIR3923-201ENST00000579521 83 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 AC091805.2-201ENST00000603848 235 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
UPK1BO75841 MIR8063-201ENST00000621930 81 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 AC079248.2-201ENST00000623779 326 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 AC022418.1-201ENST00000624118 445 ntBASIC1.17□□□□□ -2.22
UPK1BO75841 MTND5P9-201ENST00000503854 1755 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 RNU4-56P-201ENST00000364700 142 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 RNU6-827P-201ENST00000365553 106 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 RNU6-108P-201ENST00000365558 107 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 RNU6-378P-201ENST00000384324 107 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 SNORA16.2-201ENST00000390991 127 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 RNU4-46P-201ENST00000410818 138 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 RN7SKP192-201ENST00000411291 327 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 BX295541.1-201ENST00000417774 250 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 AL117339.3-201ENST00000418733 162 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 CYCSP46-201ENST00000423569 204 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 AC099677.2-201ENST00000436385 175 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 HSPE1P9-201ENST00000440046 311 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 AL033528.1-201ENST00000453780 140 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 SNRPFP4-201ENST00000456366 242 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 AC112492.4-201ENST00000456549 352 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 RNU7-14P-201ENST00000459331 62 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 AK3P2-201ENST00000507976 429 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK1BO75841 AC008549.1-201ENST00000512900 643 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.16□□□□□ -2.22
UPK1BO75841 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UPK1BO75841 AC090821.2-201ENST00000523552 176 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UPK1BO75841 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.16□□□□□ -2.22
UPK1BO75841 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.16□□□□□ -2.22
UPK1BO75841 MIR4422-201ENST00000581938 83 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 MIR4435-1-201ENST00000582552 80 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 AC013412.1-201ENST00000610687 192 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 AC083806.3-201ENST00000614016 455 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 AP000560.1-201ENST00000624150 1937 ntBASIC1.16□□□□□ -2.22
UPK1BO75841 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
UPK1BO75841 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms