Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.31□□□□□ -2.36
PFDN1O60925 DEFB108E-201ENST00000524692 240 ntBASIC0.31□□□□□ -2.36
PFDN1O60925 AC011979.2-201ENST00000527568 352 ntBASIC0.31□□□□□ -2.36
PFDN1O60925 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.31□□□□□ -2.36
PFDN1O60925 AC012507.3-201ENST00000603556 477 ntBASIC0.31□□□□□ -2.36
PFDN1O60925 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
PFDN1O60925 AC009541.1-201ENST00000438279 2662 ntBASIC0.31□□□□□ -2.36
PFDN1O60925 MIR373-201ENST00000362273 69 ntBASIC0.3□□□□□ -2.36
PFDN1O60925 RNU6-236P-201ENST00000363886 106 ntBASIC0.3□□□□□ -2.36
PFDN1O60925 MTCO1P21-201ENST00000416634 589 ntBASIC0.3□□□□□ -2.36
PFDN1O60925 MTND3P5-201ENST00000512798 333 ntBASIC0.3□□□□□ -2.36
PFDN1O60925 ZNF321P-202ENST00000550843 495 ntBASIC0.3□□□□□ -2.36
PFDN1O60925 TPRKBP2-201ENST00000565969 475 ntBASIC0.3□□□□□ -2.36
PFDN1O60925 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.3□□□□□ -2.36
PFDN1O60925 MIR3945-201ENST00000581853 98 ntBASIC0.3□□□□□ -2.36
PFDN1O60925 AL031281.1-201ENST00000604049 488 ntBASIC0.3□□□□□ -2.36
PFDN1O60925 AC021506.2-201ENST00000612354 169 ntBASIC0.3□□□□□ -2.36
PFDN1O60925 RNU6-1285P-201ENST00000363480 105 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 AC060773.1-201ENST00000421698 310 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 AC092423.1-201ENST00000430165 186 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 AL121890.1-201ENST00000435457 205 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.29□□□□□ -2.36
PFDN1O60925 RNU7-14P-201ENST00000459331 62 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 AC105758.1-201ENST00000506038 399 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 RNU4-57P-201ENST00000515980 135 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 RNA5SP384-201ENST00000516615 116 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 RNU6-1098P-201ENST00000516772 96 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.29□□□□□ -2.36
PFDN1O60925 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.29□□□□□ -2.36
PFDN1O60925 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
PFDN1O60925 AC018659.1-201ENST00000551083 169 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 KC877982.1-201ENST00000602313 470 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 AL929325.1-201ENST00000603096 117 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 RMST_7.1-201ENST00000621935 268 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 SNORD98-201ENST00000636377 67 ntBASIC0.29□□□□□ -2.36
PFDN1O60925 RNU6-78P-201ENST00000362897 107 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 Y_RNA.140-201ENST00000363474 103 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 RNU5B-4P-201ENST00000363508 111 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
PFDN1O60925 RNU6-877P-201ENST00000383868 107 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 MIR764-201ENST00000390811 85 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.28□□□□□ -2.36
PFDN1O60925 AC073614.1-201ENST00000438690 650 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 RPL23AP94-201ENST00000512518 302 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.28□□□□□ -2.36
PFDN1O60925 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.28□□□□□ -2.36
PFDN1O60925 AC090888.2-201ENST00000559765 1144 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 AC109446.2-201ENST00000567872 497 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.28□□□□□ -2.36
PFDN1O60925 AL353778.1-201ENST00000603149 408 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 AC080078.2-201ENST00000603766 501 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 AC136475.10-201ENST00000620253 385 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 AC106754.2-201ENST00000623006 233 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 SNORD3E-202ENST00000627253 216 ntBASIC0.28□□□□□ -2.36
PFDN1O60925 RNU6-534P-201ENST00000364877 106 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 RNU6-392P-201ENST00000364926 101 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
PFDN1O60925 FGF7P8-201ENST00000402994 292 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.27□□□□□ -2.37
PFDN1O60925 AL031313.1-201ENST00000448435 256 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 AC016925.1-201ENST00000458303 298 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 snoU13.23-201ENST00000458863 104 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.27□□□□□ -2.37
PFDN1O60925 AL163973.1-201ENST00000484753 577 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 HMGN1P12-201ENST00000499125 195 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.27□□□□□ -2.37
PFDN1O60925 AC022784.5-201ENST00000522241 437 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 AC011604.1-201ENST00000545978 196 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.27□□□□□ -2.37
PFDN1O60925 HMGN1P30-201ENST00000589286 268 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 AC092574.1-201ENST00000609771 420 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 AP002782.1-201ENST00000623107 614 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 AC093875.1-201ENST00000623688 504 ntBASIC0.27□□□□□ -2.37
PFDN1O60925 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.27□□□□□ -2.37
PFDN1O60925 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
PFDN1O60925 U3.8-201ENST00000363675 217 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 SNORD31B-201ENST00000364977 69 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 SNORA80D-201ENST00000384488 135 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 RNU6-1179P-201ENST00000384667 107 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.26□□□□□ -2.37
PFDN1O60925 C1DP2-201ENST00000418167 426 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.26□□□□□ -2.37
PFDN1O60925 AC010154.1-201ENST00000425857 269 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 AL353718.1-201ENST00000451028 517 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.26□□□□□ -2.37
PFDN1O60925 C1DP4-201ENST00000455429 424 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.26□□□□□ -2.37
PFDN1O60925 AC091435.1-201ENST00000505442 584 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
PFDN1O60925 RNU6-947P-201ENST00000516264 106 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 MTND2P7-201ENST00000521337 640 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 APOOP3-201ENST00000536787 586 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.26□□□□□ -2.37
PFDN1O60925 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.26□□□□□ -2.37
PFDN1O60925 MIR4781-201ENST00000585250 76 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 AC093913.1-201ENST00000614178 329 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 U6.42-201ENST00000618440 107 ntBASIC0.26□□□□□ -2.37
PFDN1O60925 RNA5SP347-201ENST00000362445 119 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms