Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 ADI1P3-201ENST00000549509 470 ntBASIC1.31□□□□□ -2.2
BRD4O60885 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.31□□□□□ -2.2
BRD4O60885 MIR5697-201ENST00000578045 78 ntBASIC1.31□□□□□ -2.2
BRD4O60885 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.31□□□□□ -2.2
BRD4O60885 AP002360.4-201ENST00000606980 481 ntBASIC1.31□□□□□ -2.2
BRD4O60885 MIR7844-201ENST00000616161 122 ntBASIC1.31□□□□□ -2.2
BRD4O60885 AC007742.2-201ENST00000618226 398 ntBASIC1.31□□□□□ -2.2
BRD4O60885 U6.42-201ENST00000618440 107 ntBASIC1.31□□□□□ -2.2
BRD4O60885 AL121890.5-201ENST00000620848 304 ntBASIC1.31□□□□□ -2.2
BRD4O60885 AC024940.5-201ENST00000622889 474 ntBASIC1.31□□□□□ -2.2
BRD4O60885 RNU1-58P-201ENST00000362413 163 ntBASIC1.3□□□□□ -2.2
BRD4O60885 RNY1P12-201ENST00000364251 105 ntBASIC1.3□□□□□ -2.2
BRD4O60885 RNU5E-5P-201ENST00000365379 116 ntBASIC1.3□□□□□ -2.2
BRD4O60885 SNORD14D-201ENST00000384390 87 ntBASIC1.3□□□□□ -2.2
BRD4O60885 MIR193B-201ENST00000384907 83 ntBASIC1.3□□□□□ -2.2
BRD4O60885 MIR597-201ENST00000384968 97 ntBASIC1.3□□□□□ -2.2
BRD4O60885 RNU11-5P-201ENST00000391216 129 ntBASIC1.3□□□□□ -2.2
BRD4O60885 RNU2-8P-201ENST00000410727 190 ntBASIC1.3□□□□□ -2.2
BRD4O60885 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.3□□□□□ -2.2
BRD4O60885 AC092809.3-201ENST00000415453 231 ntBASIC1.3□□□□□ -2.2
BRD4O60885 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.3□□□□□ -2.2
BRD4O60885 AC011233.1-201ENST00000422812 283 ntBASIC1.3□□□□□ -2.2
BRD4O60885 MTND4P20-201ENST00000424125 869 ntBASIC1.3□□□□□ -2.2
BRD4O60885 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.3□□□□□ -2.2
BRD4O60885 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.3□□□□□ -2.2
BRD4O60885 AL589872.1-201ENST00000426602 288 ntBASIC1.3□□□□□ -2.2
BRD4O60885 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.3□□□□□ -2.2
BRD4O60885 MTCO2P29-201ENST00000465212 189 ntBASIC1.3□□□□□ -2.2
BRD4O60885 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.3□□□□□ -2.2
BRD4O60885 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.3□□□□□ -2.2
BRD4O60885 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.3□□□□□ -2.2
BRD4O60885 Y_RNA.681-201ENST00000516445 113 ntBASIC1.3□□□□□ -2.2
BRD4O60885 AP003181.2-201ENST00000528941 181 ntBASIC1.3□□□□□ -2.2
BRD4O60885 AP000763.2-201ENST00000540641 163 ntBASIC1.3□□□□□ -2.2
BRD4O60885 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.3□□□□□ -2.2
BRD4O60885 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.3□□□□□ -2.2
BRD4O60885 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.3□□□□□ -2.2
BRD4O60885 AC108706.1-201ENST00000611053 297 ntBASIC1.3□□□□□ -2.2
BRD4O60885 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.3□□□□□ -2.2
BRD4O60885 SNORD114-19-201ENST00000363072 75 ntBASIC1.29□□□□□ -2.2
BRD4O60885 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
BRD4O60885 RNU6-166P-201ENST00000384371 107 ntBASIC1.29□□□□□ -2.2
BRD4O60885 RNU6-1222P-201ENST00000384615 107 ntBASIC1.29□□□□□ -2.2
BRD4O60885 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.29□□□□□ -2.2
BRD4O60885 AC114491.1-201ENST00000416095 246 ntBASIC1.29□□□□□ -2.2
BRD4O60885 ELOCP4-201ENST00000420090 333 ntBASIC1.29□□□□□ -2.2
BRD4O60885 MRPL35P3-201ENST00000421557 364 ntBASIC1.29□□□□□ -2.2
BRD4O60885 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.29□□□□□ -2.2
BRD4O60885 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.29□□□□□ -2.2
BRD4O60885 USP9YP12-201ENST00000450481 570 ntBASIC1.29□□□□□ -2.2
BRD4O60885 ZNF114P1-201ENST00000453500 292 ntBASIC1.29□□□□□ -2.2
BRD4O60885 PRELID3BP1-201ENST00000457142 540 ntBASIC1.29□□□□□ -2.2
BRD4O60885 PTP4A1P4-201ENST00000512479 322 ntBASIC1.29□□□□□ -2.2
BRD4O60885 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.29□□□□□ -2.2
BRD4O60885 AC022878.1-201ENST00000530684 149 ntBASIC1.29□□□□□ -2.2
BRD4O60885 AC092325.1-201ENST00000566449 554 ntBASIC1.29□□□□□ -2.2
BRD4O60885 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.29□□□□□ -2.2
BRD4O60885 Y_RNA.433-201ENST00000384089 102 ntBASIC1.28□□□□□ -2.2
BRD4O60885 Y_RNA.560-201ENST00000384689 102 ntBASIC1.28□□□□□ -2.2
BRD4O60885 FTH1P15-201ENST00000406984 280 ntBASIC1.28□□□□□ -2.2
BRD4O60885 Y_RNA.598-201ENST00000410480 95 ntBASIC1.28□□□□□ -2.2
BRD4O60885 RNU2-39P-201ENST00000410604 198 ntBASIC1.28□□□□□ -2.2
BRD4O60885 AC138623.1-201ENST00000418060 216 ntBASIC1.28□□□□□ -2.2
BRD4O60885 NCOR1P3-201ENST00000420479 303 ntBASIC1.28□□□□□ -2.2
BRD4O60885 AL356583.2-201ENST00000426536 280 ntBASIC1.28□□□□□ -2.2
BRD4O60885 AL596276.1-201ENST00000434465 418 ntBASIC1.28□□□□□ -2.2
BRD4O60885 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.28□□□□□ -2.2
BRD4O60885 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.28□□□□□ -2.2
BRD4O60885 UBE2D3P4-201ENST00000441973 436 ntBASIC1.28□□□□□ -2.2
BRD4O60885 AL022238.1-201ENST00000442557 355 ntBASIC1.28□□□□□ -2.2
BRD4O60885 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.28□□□□□ -2.2
BRD4O60885 AC117522.1-201ENST00000509821 380 ntBASIC1.28□□□□□ -2.2
BRD4O60885 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.28□□□□□ -2.2
BRD4O60885 AP001372.4-201ENST00000524889 472 ntBASIC1.28□□□□□ -2.2
BRD4O60885 AP003122.4-201ENST00000530980 758 ntBASIC1.28□□□□□ -2.2
BRD4O60885 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.28□□□□□ -2.2
BRD4O60885 RAB11AP2-201ENST00000545905 639 ntBASIC1.28□□□□□ -2.2
BRD4O60885 MTND1P24-201ENST00000552175 861 ntBASIC1.28□□□□□ -2.2
BRD4O60885 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.28□□□□□ -2.2
BRD4O60885 AC005668.1-201ENST00000571142 476 ntBASIC1.28□□□□□ -2.2
BRD4O60885 AC090616.2-202ENST00000584248 222 ntBASIC1.28□□□□□ -2.2
BRD4O60885 AC138749.5-201ENST00000611461 208 ntBASIC1.28□□□□□ -2.2
BRD4O60885 AC116165.2-201ENST00000616705 206 ntBASIC1.28□□□□□ -2.2
BRD4O60885 AC104010.1-201ENST00000616889 150 ntBASIC1.28□□□□□ -2.2
BRD4O60885 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.28□□□□□ -2.2
BRD4O60885 AC092656.1-203ENST00000624134 423 ntBASIC1.28□□□□□ -2.2
BRD4O60885 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.28□□□□□ -2.21
BRD4O60885 MIR412-201ENST00000362142 91 ntBASIC1.27□□□□□ -2.21
BRD4O60885 RNU6-1164P-201ENST00000364428 107 ntBASIC1.27□□□□□ -2.21
BRD4O60885 SNORA70.7-201ENST00000384159 133 ntBASIC1.27□□□□□ -2.21
BRD4O60885 Y_RNA.623-201ENST00000411128 95 ntBASIC1.27□□□□□ -2.21
BRD4O60885 Z99497.1-201ENST00000421282 135 ntBASIC1.27□□□□□ -2.21
BRD4O60885 AL365338.1-201ENST00000422282 858 ntBASIC1.27□□□□□ -2.21
BRD4O60885 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.27□□□□□ -2.21
BRD4O60885 AL627311.1-201ENST00000431514 115 ntBASIC1.27□□□□□ -2.21
BRD4O60885 MTND1P30-201ENST00000441241 901 ntBASIC1.27□□□□□ -2.21
BRD4O60885 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.27□□□□□ -2.21
BRD4O60885 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.27□□□□□ -2.21
BRD4O60885 AP001025.1-201ENST00000486139 332 ntBASIC1.27□□□□□ -2.21
BRD4O60885 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms