Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM13O60858 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.59□□□□□ -1.83
TRIM13O60858 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM13O60858 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM13O60858 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM13O60858 MIR4679-1-201ENST00000637619 75 ntBASIC3.59□□□□□ -1.83
TRIM13O60858 AP000553.6-201ENST00000641242 118 ntBASIC3.59□□□□□ -1.83
TRIM13O60858 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM13O60858 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM13O60858 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM13O60858 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
TRIM13O60858 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM13O60858 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM13O60858 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM13O60858 Y_RNA.182-201ENST00000363880 111 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 MIR10B-201ENST00000385011 110 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 SNORA40C-201ENST00000391285 128 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 RNU6-1001P-201ENST00000411265 100 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 RAB9AP3-201ENST00000412737 573 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM13O60858 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM13O60858 AC009237.8-201ENST00000445492 379 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 RAB9AP1-201ENST00000449393 573 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 Y_RNA.686-201ENST00000516548 134 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 RNU6-1234P-201ENST00000516877 103 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 RNU6-579P-201ENST00000516879 102 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 RNU6-1231P-201ENST00000517185 103 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 AL391261.3-201ENST00000557194 520 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 AL591034.3-201ENST00000605511 685 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 AL008718.3-201ENST00000610217 321 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 AL391261.4-201ENST00000616012 481 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 AC008873.1-201ENST00000625051 138 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM13O60858 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.58□□□□□ -1.84
TRIM13O60858 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TRIM13O60858 ZNF204P-201ENST00000416749 2397 ntBASIC3.58□□□□□ -1.84
TRIM13O60858 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM13O60858 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM13O60858 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM13O60858 AC007656.2-201ENST00000624902 4547 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 RNU6-50P-201ENST00000362356 103 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 RNU6-78P-201ENST00000362897 107 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 RNU5B-2P-201ENST00000363036 113 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 RNU6-275P-201ENST00000364910 107 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 RNU4-17P-201ENST00000365598 141 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 MIR539-201ENST00000365690 78 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM13O60858 RNU6-80P-201ENST00000384195 107 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 RNU6-281P-201ENST00000384212 103 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 RNU6-166P-201ENST00000384371 107 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 MIR329-1-201ENST00000385028 80 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 RPL30P13-201ENST00000418873 348 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 PTGES3P4-201ENST00000426243 356 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM13O60858 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM13O60858 AC084357.1-201ENST00000473404 255 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 AC068647.1-201ENST00000489539 2265 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 RN7SL323P-201ENST00000494712 295 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM13O60858 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM13O60858 RNU2-27P-201ENST00000516185 142 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 SNORA25.12-201ENST00000516202 82 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 RNU6-191P-201ENST00000516295 94 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 RNU2-58P-201ENST00000516403 183 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 RNA5SP170-201ENST00000517150 101 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM13O60858 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM13O60858 TRAV28-201ENST00000557548 323 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 AC053481.4-201ENST00000583164 216 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 AC005176.2-201ENST00000596933 147 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 AL606490.9-201ENST00000603331 271 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 AC022441.3-201ENST00000605737 136 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 AC005296.1-201ENST00000616145 209 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 AF127577.6-201ENST00000623352 2191 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 U6.98-201ENST00000637157 84 ntBASIC3.57□□□□□ -1.84
TRIM13O60858 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM13O60858 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM13O60858 AL359693.1-201ENST00000614959 2407 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 AC110774.1-201ENST00000623567 2018 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM13O60858 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM13O60858 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM13O60858 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM13O60858 TNPO1P3-201ENST00000436471 2662 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 SNORA63.4-201ENST00000362763 126 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 RNU6-1272P-201ENST00000362776 107 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 RNU4-80P-201ENST00000363200 141 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 RNU6-1255P-201ENST00000363434 112 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 RNU6-105P-201ENST00000363909 104 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 RNU6-1145P-201ENST00000384246 107 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM13O60858 AC005042.3-201ENST00000453230 174 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM13O60858 SNRPGP3-201ENST00000469405 227 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 KC877373.1-201ENST00000479066 408 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 CYCTP-201ENST00000504253 315 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 RNA5SP468-201ENST00000516782 93 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 SNORA31.19-201ENST00000517079 126 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 RNA5SP165-201ENST00000517142 115 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms