Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CLOCKO15516 RNU6-1097P-201ENST00000363586 107 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 RNU6-1141P-201ENST00000364520 107 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 RNU6-338P-201ENST00000383888 105 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 RNU6-43P-201ENST00000384302 107 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CLOCKO15516 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 ISCA1P6-201ENST00000427740 390 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.45□□□□□ -2.18
CLOCKO15516 ART2BP-201ENST00000453501 499 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.45□□□□□ -2.18
CLOCKO15516 RNU1-131P-201ENST00000458943 161 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 RNU7-182P-201ENST00000459009 62 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.45□□□□□ -2.18
CLOCKO15516 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.45□□□□□ -2.18
CLOCKO15516 MTND1P22-201ENST00000510572 951 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.45□□□□□ -2.18
CLOCKO15516 SNORD27.1-201ENST00000516319 72 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 RNU6-232P-201ENST00000517144 64 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CLOCKO15516 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.45□□□□□ -2.18
CLOCKO15516 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.45□□□□□ -2.18
CLOCKO15516 SUB1P4-201ENST00000566062 339 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.45□□□□□ -2.18
CLOCKO15516 AL590229.1-201ENST00000603497 542 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 AC091304.6-201ENST00000619761 202 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 SEPT14P19-203ENST00000633205 211 ntBASIC1.45□□□□□ -2.18
CLOCKO15516 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CLOCKO15516 RNU1-42P-201ENST00000364033 160 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 RNU6-1303P-201ENST00000364841 107 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 RNU6-108P-201ENST00000365558 107 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CLOCKO15516 RNU5A-2P-201ENST00000384337 116 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 RNU6-195P-201ENST00000411352 109 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 MTND3P17-201ENST00000416968 344 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 AL358453.1-201ENST00000422522 250 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.44□□□□□ -2.18
CLOCKO15516 AL596276.1-201ENST00000434465 418 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.44□□□□□ -2.18
CLOCKO15516 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CLOCKO15516 AL162395.1-201ENST00000457882 422 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 RNU7-125P-201ENST00000458760 62 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 AC010409.1-201ENST00000487382 476 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 MTCO3P7-201ENST00000510008 774 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.44□□□□□ -2.18
CLOCKO15516 AC005741.1-201ENST00000511094 432 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.44□□□□□ -2.18
CLOCKO15516 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.44□□□□□ -2.18
CLOCKO15516 AC123912.5-201ENST00000605470 343 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.44□□□□□ -2.18
CLOCKO15516 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.44□□□□□ -2.18
CLOCKO15516 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.44□□□□□ -2.18
CLOCKO15516 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CLOCKO15516 Y_RNA.164-201ENST00000363709 102 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 RNU6-553P-201ENST00000364047 96 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 RNU6-336P-201ENST00000364891 107 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 U8.10-201ENST00000384260 133 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 RNU6-692P-201ENST00000384496 107 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CLOCKO15516 RNU4-46P-201ENST00000410818 138 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 HMGN1P14-201ENST00000412459 517 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 AL513185.2-201ENST00000425543 193 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 AC010975.2-201ENST00000427781 588 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 AC244670.1-201ENST00000436879 112 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 AL033528.1-201ENST00000453780 140 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 AC130509.1-201ENST00000464158 433 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 SNRPGP7-201ENST00000469016 106 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 LRRC34P2-201ENST00000514850 553 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 RNU6-1053P-201ENST00000515930 101 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 Y_RNA.676-201ENST00000516393 96 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 SNORA31.17-201ENST00000516953 127 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 RNA5SP503-201ENST00000517047 117 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CLOCKO15516 ZNF321P-202ENST00000550843 495 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 AC008015.1-201ENST00000555505 465 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.43□□□□□ -2.18
CLOCKO15516 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.43□□□□□ -2.18
CLOCKO15516 MIR4303-201ENST00000581299 66 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 VN1R107P-201ENST00000601784 209 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 AC008945.2-201ENST00000606056 604 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 AC122133.1-201ENST00000613964 233 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 MIR8074-201ENST00000615081 81 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 AP001506.1-201ENST00000615444 211 ntBASIC1.43□□□□□ -2.18
CLOCKO15516 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.43□□□□□ -2.18
CLOCKO15516 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CLOCKO15516 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.42□□□□□ -2.18
CLOCKO15516 RNU1-62P-201ENST00000362599 164 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 U3.4-201ENST00000363352 213 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CLOCKO15516 RNU6-439P-201ENST00000384188 106 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 SNORA40.3-201ENST00000390964 122 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 SNORA67.5-201ENST00000391036 107 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 MTCYBP2-201ENST00000407745 171 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 RNU4-62P-201ENST00000410125 130 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 BTF3P4-201ENST00000418852 495 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 AC007098.1-201ENST00000420122 367 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 AC123900.1-201ENST00000420390 96 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms