Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXN1O15353 NDUFB4P9-201ENST00000511646 388 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 RNU6-914P-201ENST00000516749 109 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 RN7SKP258-201ENST00000517151 304 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXN1O15353 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXN1O15353 SNRPGP16-201ENST00000533275 226 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 TRAV32-201ENST00000553993 340 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.49□□□□□ -1.85
FOXN1O15353 MIR3910-1-201ENST00000580936 111 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 SNRPGP15-201ENST00000600149 222 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXN1O15353 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
FOXN1O15353 Y_RNA.29-201ENST00000362570 113 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 RNA5SP68-201ENST00000363885 119 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 RNU6-280P-201ENST00000364145 104 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 Y_RNA.237-201ENST00000364439 102 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 Y_RNA.270-201ENST00000364693 104 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 Y_RNA.274-201ENST00000364714 101 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 RNU6-629P-201ENST00000384061 103 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 RNU6-607P-201ENST00000411283 108 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXN1O15353 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXN1O15353 AL513043.1-201ENST00000439124 535 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 RPEP5-201ENST00000441137 268 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 AC117440.1-201ENST00000474107 571 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 AC078918.1-201ENST00000498515 228 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 HMGB1P22-201ENST00000505315 124 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 RNU6-1095P-201ENST00000516148 108 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 RNU5B-3P-201ENST00000516601 115 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 AC034114.1-201ENST00000520293 285 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 AC107016.2-201ENST00000547968 190 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 AMZ2P1-203ENST00000565833 850 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 AL355877.2-201ENST00000603670 358 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXN1O15353 MIR6817-201ENST00000615588 66 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 AL353997.5-201ENST00000618886 171 ntBASIC3.48□□□□□ -1.85
FOXN1O15353 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXN1O15353 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.48□□□□□ -1.85
FOXN1O15353 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
FOXN1O15353 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.48□□□□□ -1.85
FOXN1O15353 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
FOXN1O15353 Y_RNA.65-201ENST00000362846 100 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 Y_RNA.297-201ENST00000364950 91 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 Y_RNA.324-201ENST00000365165 102 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 U8.8-201ENST00000365399 135 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 RNU6-746P-201ENST00000384112 109 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 RNU6-187P-201ENST00000384139 106 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 RNU6-886P-201ENST00000384319 105 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 AL513475.1-201ENST00000406602 315 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 RNU2-71P-201ENST00000411395 189 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 EIF4EP2-201ENST00000422816 654 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 SDAD1P3-201ENST00000427380 333 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.47□□□□□ -1.85
FOXN1O15353 AC104332.1-201ENST00000440471 797 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 AL121871.1-201ENST00000443413 436 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.47□□□□□ -1.85
FOXN1O15353 RN7SL330P-201ENST00000469709 307 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 MED28P2-201ENST00000475771 317 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.47□□□□□ -1.85
FOXN1O15353 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.47□□□□□ -1.85
FOXN1O15353 RN7SKP282-201ENST00000516824 299 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 CPDP1-201ENST00000579660 283 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 LRRC37A5P-203ENST00000580181 585 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 AC123912.5-201ENST00000605470 343 ntBASIC3.47□□□□□ -1.85
FOXN1O15353 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.47□□□□□ -1.85
FOXN1O15353 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
FOXN1O15353 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
FOXN1O15353 AP000560.1-201ENST00000624150 1937 ntBASIC3.46□□□□□ -1.85
FOXN1O15353 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
FOXN1O15353 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
FOXN1O15353 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
FOXN1O15353 AL391987.6-201ENST00000305671 199 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 AC073325.2-201ENST00000339545 159 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 RNU6-1155P-201ENST00000363554 107 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 MIR628-201ENST00000385229 95 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
FOXN1O15353 SNORA69.1-201ENST00000390904 137 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 RNA5SP239-201ENST00000410218 129 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 Z98742.3-201ENST00000418637 326 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.46□□□□□ -1.86
FOXN1O15353 UQCRHP3-201ENST00000451503 251 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 AP004371.1-201ENST00000525240 214 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.46□□□□□ -1.86
FOXN1O15353 AC005951.2-201ENST00000576282 495 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 MIR5701-3-201ENST00000578890 82 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 MIR548AC-201ENST00000585049 88 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 MIR5701-1-201ENST00000585138 82 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 AL121917.1-203ENST00000605534 577 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.46□□□□□ -1.86
FOXN1O15353 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 MIR5701-2-201ENST00000615634 82 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 AC007318.2-201ENST00000620999 243 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.46□□□□□ -1.86
FOXN1O15353 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
FOXN1O15353 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.46□□□□□ -1.86
FOXN1O15353 RNY1-201ENST00000364228 113 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms