Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.98□□□□□ -2.25
UBFD1O14562 AC002400.1-201ENST00000569310 726 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 AL139286.2-201ENST00000606838 396 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
UBFD1O14562 AC006927.4-201ENST00000639187 543 ntBASIC0.98□□□□□ -2.25
UBFD1O14562 Y_RNA.36-201ENST00000362602 112 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 RNU6-37P-201ENST00000362692 107 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 RNU6-11P-201ENST00000364234 107 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 SNORD32B-201ENST00000364460 84 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 RNU6-61P-201ENST00000365528 109 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 SNORA18.2-201ENST00000383865 132 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 SNORA22-201ENST00000383907 134 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 RNU6-160P-201ENST00000384591 107 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 RNU6-296P-201ENST00000384608 107 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 SNORA22C-201ENST00000384614 134 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 MIR598-201ENST00000384868 97 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 RNU1-78P-201ENST00000391248 165 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 RAP1BP3-201ENST00000407180 549 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 RNA5SP111-201ENST00000411386 101 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 AL008987.1-201ENST00000415528 237 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.97□□□□□ -2.25
UBFD1O14562 NCOR1P3-201ENST00000420479 303 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.97□□□□□ -2.25
UBFD1O14562 TOMM22P2-201ENST00000430735 237 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 AC099513.1-201ENST00000490423 301 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 AC112204.1-201ENST00000502591 103 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 MTND2P33-201ENST00000506452 1031 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.97□□□□□ -2.25
UBFD1O14562 MTND4P33-201ENST00000556706 766 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 AC090888.2-201ENST00000559765 1144 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 MIR5697-201ENST00000578045 78 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 MIR5094-201ENST00000578766 85 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 AL353778.1-201ENST00000603149 408 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.97□□□□□ -2.25
UBFD1O14562 AL031775.1-201ENST00000607014 887 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.97□□□□□ -2.25
UBFD1O14562 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.97□□□□□ -2.25
UBFD1O14562 AP000720.1-201ENST00000625091 483 ntBASIC0.97□□□□□ -2.25
UBFD1O14562 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.97□□□□□ -2.25
UBFD1O14562 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.97□□□□□ -2.25
UBFD1O14562 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
UBFD1O14562 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
UBFD1O14562 MTND4P9-201ENST00000507819 1346 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 LINC02555-201ENST00000563933 1951 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
UBFD1O14562 Y_RNA.332-201ENST00000365271 113 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 MIR558-201ENST00000384920 94 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 MIR222-201ENST00000384992 110 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 MIR620-201ENST00000385232 95 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 MIR618-201ENST00000385287 98 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 RNU2-3P-201ENST00000410144 191 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.96□□□□□ -2.26
UBFD1O14562 CYCSP33-201ENST00000414485 327 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 C1DP2-201ENST00000418167 426 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
UBFD1O14562 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.96□□□□□ -2.26
UBFD1O14562 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.96□□□□□ -2.26
UBFD1O14562 AL606662.1-201ENST00000445763 553 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 snoU13.9-201ENST00000458927 103 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 AC034244.1-201ENST00000507687 207 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.96□□□□□ -2.26
UBFD1O14562 RNU5A-4P-201ENST00000516588 111 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 RNU6-113P-201ENST00000516653 101 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 MIR4422-201ENST00000581938 83 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.96□□□□□ -2.26
UBFD1O14562 MTCO2P2-201ENST00000591258 225 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 AC095038.3-201ENST00000634439 195 ntBASIC0.96□□□□□ -2.26
UBFD1O14562 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
UBFD1O14562 AC245060.5-201ENST00000610778 3293 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
UBFD1O14562 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
UBFD1O14562 RNU5F-6P-201ENST00000362979 116 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 RNU6-1285P-201ENST00000363480 105 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 SNORD114-26-201ENST00000363543 72 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 MIR513B-201ENST00000385136 84 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 MIR548J-201ENST00000408833 112 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 RNU2-39P-201ENST00000410604 198 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 Y_RNA.608-201ENST00000410647 95 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 SSR1P2-201ENST00000415208 787 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 AC119618.1-201ENST00000434191 222 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 AC004854.1-201ENST00000440356 349 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 MTCO1P44-201ENST00000441935 243 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 MTND1P18-201ENST00000448191 573 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 AC006026.2-201ENST00000457376 180 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 RNU6-333P-201ENST00000459117 107 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 AC145146.1-201ENST00000496370 254 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.95□□□□□ -2.26
UBFD1O14562 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.95□□□□□ -2.26
UBFD1O14562 TRAV32-201ENST00000553993 340 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.95□□□□□ -2.26
UBFD1O14562 HMGN1P30-201ENST00000589286 268 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.95□□□□□ -2.26
UBFD1O14562 AP000811.1-201ENST00000603803 651 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 AP000654.2-201ENST00000605633 586 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 AL121992.2-201ENST00000606262 256 ntBASIC0.95□□□□□ -2.26
UBFD1O14562 RNU6-87P-201ENST00000607561 108 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 262.3 ms