Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.07□□□□□ -2.4
CACNA1AO00555 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.07□□□□□ -2.4
CACNA1AO00555 AL136520.1-202ENST00000555494 763 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 MTCO2P2-201ENST00000591258 225 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AL590229.1-201ENST00000603497 542 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AP000860.1-201ENST00000605250 559 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC112220.2-201ENST00000605513 533 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC104465.1-201ENST00000611365 139 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC090617.9-201ENST00000623751 147 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
CACNA1AO00555 AC100810.6-201ENST00000638068 285 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 RNU6-778P-201ENST00000363269 103 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 RNU6-1078P-201ENST00000364522 103 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 MIR942-201ENST00000401111 86 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 RPL26P27-201ENST00000414397 437 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 CCDC58P2-201ENST00000417131 366 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.07□□□□□ -2.4
CACNA1AO00555 AL139421.1-201ENST00000423010 169 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 PSMA6P3-201ENST00000428242 164 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.07□□□□□ -2.4
CACNA1AO00555 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.07□□□□□ -2.4
CACNA1AO00555 PDCD5P2-201ENST00000507570 312 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC116655.1-201ENST00000508324 901 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.07□□□□□ -2.4
CACNA1AO00555 RNA5SP503-201ENST00000517047 117 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 RNU6-840P-201ENST00000517275 65 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.07□□□□□ -2.4
CACNA1AO00555 AC018630.3-201ENST00000542637 96 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 RAB11AP2-201ENST00000545905 639 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.07□□□□□ -2.4
CACNA1AO00555 MIR3167-201ENST00000579623 85 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC107952.2-201ENST00000606048 486 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AL583856.2-201ENST00000606298 543 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AC098614.4-201ENST00000607601 462 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 AL159972.1-201ENST00000625150 448 ntBASIC0.07□□□□□ -2.4
CACNA1AO00555 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
CACNA1AO00555 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
CACNA1AO00555 SNORD1A-201ENST00000364968 72 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 Y_RNA.548-201ENST00000384656 105 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 RAC1P6-201ENST00000423911 575 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AL589872.1-201ENST00000426602 288 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 TXNL1P1-201ENST00000429528 554 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AL512637.2-201ENST00000431287 1256 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AC010153.1-201ENST00000432862 727 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.06□□□□□ -2.4
CACNA1AO00555 AC244505.3-201ENST00000454598 187 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.06□□□□□ -2.4
CACNA1AO00555 AC105758.1-201ENST00000506038 399 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 SCARNA17-201ENST00000516183 144 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 RN7SKP258-201ENST00000517151 304 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 RNU6-667P-201ENST00000517186 102 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.06□□□□□ -2.4
CACNA1AO00555 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.06□□□□□ -2.4
CACNA1AO00555 AC005951.2-201ENST00000576282 495 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.06□□□□□ -2.4
CACNA1AO00555 SUMO2P14-201ENST00000604488 293 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AC079610.2-201ENST00000604818 690 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AL158163.2-201ENST00000619110 700 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
CACNA1AO00555 RNU6-1339P-201ENST00000363574 91 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 SNORD114-6-201ENST00000364393 72 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 RNU6-140P-201ENST00000384566 108 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 RNU6-360P-201ENST00000390944 104 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 SNORD89-201ENST00000390981 114 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AL133264.1-201ENST00000407157 562 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AC008267.5-201ENST00000424928 265 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.06□□□□□ -2.4
CACNA1AO00555 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.06□□□□□ -2.4
CACNA1AO00555 RPL30P1-201ENST00000488676 339 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AL160314.1-201ENST00000490836 438 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AC108740.1-201ENST00000498629 225 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.06□□□□□ -2.4
CACNA1AO00555 AC110760.3-202ENST00000515177 371 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 SNORA31.4-201ENST00000516049 129 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 RNU6-885P-201ENST00000516607 104 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.06□□□□□ -2.4
CACNA1AO00555 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.06□□□□□ -2.4
CACNA1AO00555 ARL2BPP5-201ENST00000523141 481 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.06□□□□□ -2.4
CACNA1AO00555 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.06□□□□□ -2.4
CACNA1AO00555 LARP7P2-201ENST00000575306 125 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 MIR5094-201ENST00000578766 85 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AL355802.4-201ENST00000607635 548 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.06□□□□□ -2.4
CACNA1AO00555 AC080188.3-201ENST00000624842 748 ntBASIC0.06□□□□□ -2.4
CACNA1AO00555 SEC63P2-201ENST00000503863 1939 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 U3.9-201ENST00000363823 204 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 RNU6-944P-201ENST00000364023 107 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 RNU6-637P-201ENST00000384050 107 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 Y_RNA.437-201ENST00000384113 113 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 Y_RNA.442-201ENST00000384131 102 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 RNU6-1274P-201ENST00000384557 107 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 RNU6-1222P-201ENST00000384615 107 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AC114482.1-201ENST00000418010 247 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AC007435.1-201ENST00000421086 415 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.05□□□□□ -2.4
CACNA1AO00555 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.05□□□□□ -2.4
CACNA1AO00555 AC099677.2-201ENST00000436385 175 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AC012308.1-201ENST00000451232 178 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms