Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 MIR4694-201ENST00000578534 80 ntBASIC4.17□□□□□ -1.74
RNF223E7ERA6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.17□□□□□ -1.74
RNF223E7ERA6 AC011944.2-201ENST00000624440 683 ntBASIC4.17□□□□□ -1.74
RNF223E7ERA6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF223E7ERA6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF223E7ERA6 AC104260.2-201ENST00000623551 3497 ntBASIC4.17□□□□□ -1.74
RNF223E7ERA6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF223E7ERA6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF223E7ERA6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF223E7ERA6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF223E7ERA6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF223E7ERA6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF223E7ERA6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF223E7ERA6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.16□□□□□ -1.74
RNF223E7ERA6 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNF223E7ERA6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
RNF223E7ERA6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.16□□□□□ -1.74
RNF223E7ERA6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNF223E7ERA6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNF223E7ERA6 Y_RNA.507-201ENST00000384500 99 ntBASIC4.16□□□□□ -1.74
RNF223E7ERA6 Y_RNA.531-201ENST00000384589 121 ntBASIC4.16□□□□□ -1.74
RNF223E7ERA6 MIR518F-201ENST00000384973 87 ntBASIC4.16□□□□□ -1.74
RNF223E7ERA6 MRPL35P3-201ENST00000421557 364 ntBASIC4.16□□□□□ -1.74
RNF223E7ERA6 SNRPGP10-201ENST00000432323 225 ntBASIC4.16□□□□□ -1.74
RNF223E7ERA6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF223E7ERA6 HIGD1AP1-201ENST00000550979 275 ntBASIC4.16□□□□□ -1.74
RNF223E7ERA6 MIR4277-201ENST00000578298 84 ntBASIC4.16□□□□□ -1.74
RNF223E7ERA6 FAM27D1-201ENST00000612308 341 ntBASIC4.16□□□□□ -1.74
RNF223E7ERA6 U3.53-201ENST00000628922 216 ntBASIC4.16□□□□□ -1.74
RNF223E7ERA6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF223E7ERA6 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNF223E7ERA6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF223E7ERA6 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF223E7ERA6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.15□□□□□ -1.74
RNF223E7ERA6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.15□□□□□ -1.74
RNF223E7ERA6 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RNF223E7ERA6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RNF223E7ERA6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RNF223E7ERA6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.15□□□□□ -1.74
RNF223E7ERA6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF223E7ERA6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
RNF223E7ERA6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF223E7ERA6 Y_RNA.96-201ENST00000363092 109 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 SNORD115-35-201ENST00000365122 82 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 SNORA2.2-201ENST00000365473 135 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 SNORA2.3-201ENST00000383920 135 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 SNORA70.6-201ENST00000383934 134 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 SNORA70.10-201ENST00000384515 134 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RNF223E7ERA6 AL513477.1-202ENST00000417061 214 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 BTF3P4-201ENST00000418852 495 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 VDAC1P3-201ENST00000434069 851 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 AC009238.1-201ENST00000442165 424 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 AC009237.6-201ENST00000446969 424 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 RNU2-11P-201ENST00000459191 187 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 RPL21P129-201ENST00000491732 478 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 RPS29P21-201ENST00000496272 170 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 RNU6-948P-201ENST00000516374 107 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 RNU7-6P-201ENST00000516845 62 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 RNU7-172P-201ENST00000517125 64 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.15□□□□□ -1.75
RNF223E7ERA6 AC008739.2-201ENST00000597006 317 ntBASIC4.15□□□□□ -1.75
RNF223E7ERA6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.15□□□□□ -1.75
RNF223E7ERA6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF223E7ERA6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.15□□□□□ -1.75
RNF223E7ERA6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF223E7ERA6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
RNF223E7ERA6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF223E7ERA6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RNF223E7ERA6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RNF223E7ERA6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF223E7ERA6 RNU6-832P-201ENST00000363319 107 ntBASIC4.14□□□□□ -1.75
RNF223E7ERA6 Y_RNA.190-201ENST00000363964 101 ntBASIC4.14□□□□□ -1.75
RNF223E7ERA6 Y_RNA.242-201ENST00000364473 110 ntBASIC4.14□□□□□ -1.75
RNF223E7ERA6 Y_RNA.410-201ENST00000383992 113 ntBASIC4.14□□□□□ -1.75
RNF223E7ERA6 EIF4A1P3-201ENST00000411521 244 ntBASIC4.14□□□□□ -1.75
RNF223E7ERA6 AC007738.1-201ENST00000413892 348 ntBASIC4.14□□□□□ -1.75
RNF223E7ERA6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF223E7ERA6 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.14□□□□□ -1.75
RNF223E7ERA6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF223E7ERA6 AC008507.4-201ENST00000585464 127 ntBASIC4.14□□□□□ -1.75
RNF223E7ERA6 MIR6853-201ENST00000619642 74 ntBASIC4.14□□□□□ -1.75
RNF223E7ERA6 AC019206.1-201ENST00000621938 425 ntBASIC4.14□□□□□ -1.75
RNF223E7ERA6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF223E7ERA6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF223E7ERA6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF223E7ERA6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF223E7ERA6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF223E7ERA6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF223E7ERA6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF223E7ERA6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
RNF223E7ERA6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF223E7ERA6 AC010300.1-201ENST00000600671 5134 ntBASIC4.13□□□□□ -1.75
RNF223E7ERA6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RNF223E7ERA6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
RNF223E7ERA6 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF223E7ERA6 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RNF223E7ERA6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF223E7ERA6 AC092376.2-201ENST00000622621 4116 ntBASIC4.13□□□□□ -1.75
RNF223E7ERA6 Y_RNA.454-201ENST00000384224 113 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms