Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 MIR548F1-201ENST00000408667 84 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AL030996.1-201ENST00000411430 235 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 SNORD56-201ENST00000413522 71 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 SNRPGP7-201ENST00000469016 106 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 MTCYBP40-201ENST00000509390 1135 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 RNA5SP112-201ENST00000515937 99 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 RNA5SP182-201ENST00000516064 82 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC023050.3-201ENST00000541142 333 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC079598.5-201ENST00000547460 117 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC090115.3-201ENST00000553218 849 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC103996.1-201ENST00000555468 102 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 MTCO3P23-201ENST00000561363 289 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC105245.1-201ENST00000581934 244 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC010525.2-201ENST00000590920 195 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 VN1R80P-201ENST00000597126 338 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC092747.3-201ENST00000603769 301 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 RNU6-85P-201ENST00000605989 107 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC004492.1-201ENST00000607036 742 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC069294.1-201ENST00000608397 350 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AL121757.2-201ENST00000611223 313 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 U2.17-201ENST00000611454 95 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 AC068137.4-201ENST00000638485 296 ntBASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
NKX2-6A6NCS4 ZNF355P-201ENST00000427301 3216 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 RNU6-486P-201ENST00000363116 107 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 U3.13-201ENST00000364804 214 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 RNU6-827P-201ENST00000365553 106 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 Y_RNA.399-201ENST00000383955 105 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 RNU6-622P-201ENST00000384272 103 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 Y_RNA.481-201ENST00000384373 102 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 SNORA17.3-201ENST00000391159 129 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 RNU2-20P-201ENST00000410425 191 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 CYCSP48-201ENST00000417124 323 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 AC008267.5-201ENST00000424928 265 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 MTCO1P20-201ENST00000425366 358 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 MICF-203ENST00000432679 129 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 AC083904.1-201ENST00000487828 231 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 RPL39P5-202ENST00000512505 151 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 RNU6-377P-201ENST00000515965 102 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 RNU7-193P-201ENST00000516723 65 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 RNU2-44P-201ENST00000516795 194 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 GNAI2P1-201ENST00000541815 315 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 AC136619.2-201ENST00000563361 631 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 TPRKBP2-201ENST00000565969 475 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 EIF1P4-201ENST00000572664 335 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 MIR5571-201ENST00000577998 113 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 MIR5089-201ENST00000580047 84 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 AC107304.1-201ENST00000604229 296 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 AC009233.1-201ENST00000616477 371 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 MIR3529-201ENST00000637713 78 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 U4.7-201ENST00000638126 106 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 MTND5P30-201ENST00000452896 1731 ntBASIC1.71□□□□□ -2.14
NKX2-6A6NCS4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 SNORD114-19-201ENST00000363072 75 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 RNU4-12P-201ENST00000365233 139 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 RNU6-692P-201ENST00000384496 107 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 MIR544A-201ENST00000384855 91 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 MIR676-201ENST00000390702 67 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 RNU6-908P-201ENST00000410160 94 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 Y_RNA.615-201ENST00000410769 117 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 RNU6-293P-201ENST00000411259 106 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 POLHP1-201ENST00000411806 470 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 EIF4EP4-201ENST00000424916 578 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 AL365400.1-201ENST00000431854 640 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 RPL22P13-201ENST00000493291 347 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 Y_RNA.673-201ENST00000516306 88 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 MTND1P35-201ENST00000526739 508 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 AC090897.2-201ENST00000581715 130 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 MIR3935-201ENST00000583472 104 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 AC068790.6-201ENST00000602558 258 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 AC012493.3-201ENST00000604494 112 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 AC092807.2-201ENST00000609367 243 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 AL161423.1-201ENST00000613700 262 ntBASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.7□□□□□ -2.14
NKX2-6A6NCS4 RNU6-212P-201ENST00000362642 104 ntBASIC1.69□□□□□ -2.14
NKX2-6A6NCS4 Y_RNA.167-201ENST00000363735 109 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms