Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL133475.1-201ENST00000404414 305 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 NUP35P1-201ENST00000422734 947 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 RPL39P40-201ENST00000445481 146 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 MTND5P30-201ENST00000452896 1731 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 RPS29P12-201ENST00000460178 152 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 S100A11P2-201ENST00000467589 312 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 RPL30P12-201ENST00000474666 353 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 AC068781.1-201ENST00000488231 618 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 AC104564.1-201ENST00000493028 407 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 AC016632.1-201ENST00000503994 196 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 AC022493.2-201ENST00000506122 481 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 SCARNA17.1-201ENST00000516211 143 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 SCARNA17.2-201ENST00000516334 143 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 AC115990.1-201ENST00000526957 301 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 AL442663.2-201ENST00000554385 511 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 AC020661.2-201ENST00000560114 134 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 MIR5571-201ENST00000577998 113 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 AL133393.1-201ENST00000603277 287 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 AL137843.1-201ENST00000605078 385 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 SCARNA17.4-201ENST00000614296 143 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 uc_338.22-201ENST00000622722 187 ntBASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.72□□□□□ -1.97
TCRBV7S3A2A0A539 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.97
TCRBV7S3A2A0A539 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
TCRBV7S3A2A0A539 AC092435.3-201ENST00000565538 3654 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 AL359854.1-201ENST00000614203 1594 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 AC092268.1-201ENST00000342691 405 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 Y_RNA.5-201ENST00000362334 102 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 Y_RNA.48-201ENST00000362710 103 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 RNU6-1286P-201ENST00000383871 107 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 SAR1AP2-201ENST00000392696 594 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 RNU6-1140P-201ENST00000410517 106 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 AC096664.2-201ENST00000411843 406 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 AL139281.1-201ENST00000422120 335 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 AC018865.2-201ENST00000423631 129 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 Y_RNA.631-201ENST00000459607 101 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 RPL30P10-201ENST00000488148 337 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 RPL17P19-201ENST00000489069 552 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 SEM1P1-201ENST00000506694 209 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 HSPE1P4-201ENST00000550617 308 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 SNRPGP18-201ENST00000553000 214 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 SNRPGP17-201ENST00000603780 214 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 HMGB1P24-202ENST00000615653 685 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 AC091925.1-201ENST00000623204 462 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 AL450472.1-202ENST00000637286 180 ntBASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TCRBV7S3A2A0A539 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 RNY1P16-201ENST00000363063 111 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 RNU6-529P-201ENST00000363383 104 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 SNORA68.1-201ENST00000364537 132 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 Y_RNA.252-201ENST00000364556 101 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 SNORD21-201ENST00000383953 95 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 RNU6-142P-201ENST00000384019 107 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 MIR548P-201ENST00000408336 84 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 MIR1289-1-201ENST00000408836 144 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 MICF-203ENST00000432679 129 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 RPL23AP50-201ENST00000434149 455 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 AC244670.1-201ENST00000436879 112 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 MIR2053-201ENST00000459295 91 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 RPS27AP9-201ENST00000477681 438 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 RPL36AP48-201ENST00000485521 314 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 RNU6-264P-201ENST00000517134 104 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 MIR5195-201ENST00000583555 115 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 AL353621.2-201ENST00000605340 133 ntBASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms