Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.04□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 ICE2P2-201ENST00000483823 2787 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 RNU6-336P-201ENST00000364891 107 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 MIR520A-201ENST00000384862 85 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 RNU6-360P-201ENST00000390944 104 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 RNA5SP201-201ENST00000410316 124 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 RPS27P16-201ENST00000425758 201 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 HSPE1P9-201ENST00000440046 311 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 ZNF114P1-201ENST00000453500 292 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 SNORD13-201ENST00000459299 104 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 RPL9P9-202ENST00000466501 579 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 RNA5SP61-201ENST00000516453 100 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 RNU2-46P-201ENST00000517038 113 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 AC109479.2-201ENST00000517842 174 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 AC090572.1-201ENST00000519251 160 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 HMGB1P33-201ENST00000563485 527 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 AL121890.5-201ENST00000620848 304 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 MIR8063-201ENST00000621930 81 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 AC011155.2-201ENST00000623202 216 ntBASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
TRAV8-3A0A0A6YYJ7 RNU6-428P-201ENST00000362942 107 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 U3.4-201ENST00000363352 213 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RNU4-56P-201ENST00000364700 142 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RNU6-715P-201ENST00000365204 103 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RNU6-438P-201ENST00000365561 103 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 SNORA32.2-201ENST00000384049 122 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 SNORA12.2-201ENST00000391040 156 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AL358453.1-201ENST00000422522 250 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC078809.1-201ENST00000427601 140 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 VN1R108P-201ENST00000431580 830 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 FTH1P12-201ENST00000432137 551 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC099677.2-201ENST00000436385 175 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 GTF2IP13-201ENST00000438487 386 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC027119.1-201ENST00000440877 241 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 Z73417.1-201ENST00000447373 778 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 GAPDHP17-201ENST00000449858 1001 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC013470.1-201ENST00000453438 462 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AMD1P1-201ENST00000457220 922 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RPL36AP21-201ENST00000490372 323 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC098862.1-201ENST00000504991 413 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC108078.1-201ENST00000508073 725 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 MTCO3P28-201ENST00000513351 515 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 MRPS36P3-201ENST00000519284 130 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AP005597.4-201ENST00000526762 229 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 VN1R107P-201ENST00000601784 209 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AL133173.2-201ENST00000614270 90 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC091304.6-201ENST00000619761 202 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 U6.114-201ENST00000636407 96 ntBASIC1.02□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC100821.1-201ENST00000523153 2479 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RNU6-1287P-201ENST00000362914 107 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RNU1-17P-201ENST00000363022 152 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RNU6-1214P-201ENST00000363650 109 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RNU4-28P-201ENST00000364739 141 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 SNORD32A-201ENST00000364805 84 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RNU6-1303P-201ENST00000364841 107 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 Y_RNA.367-201ENST00000365544 101 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RNU6-1060P-201ENST00000384664 107 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 MIR1323-201ENST00000408090 73 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RNU6-584P-201ENST00000410350 95 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 Y_RNA.598-201ENST00000410480 95 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RN7SKP61-201ENST00000410642 295 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RNU2-41P-201ENST00000410991 178 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 EBAG9P1-201ENST00000418955 543 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 HSFY7P-201ENST00000432672 318 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC245047.4-201ENST00000433189 144 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AL135790.2-201ENST00000437701 267 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 HSFY8P-201ENST00000437934 318 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC073614.1-201ENST00000438690 650 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 UBE2D3P4-201ENST00000441973 436 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 HSFY5P-201ENST00000453726 309 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RNA5SP269-201ENST00000459032 137 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 SNORD11.1-201ENST00000459482 85 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 TOMM22P6-201ENST00000465035 409 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 RNU6-1178P-201ENST00000516674 107 ntBASIC1.01□□□□□ -2.25
TRAV8-3A0A0A6YYJ7 Vault.3-201ENST00000516676 95 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms