Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 AC093831.2-201ENST00000624393 3427 ntBASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 RNU1-72P-201ENST00000362976 153 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU6-1180P-201ENST00000364935 107 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 SNORA51.11-201ENST00000384442 131 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 Y_RNA.551-201ENST00000384661 102 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU6-823P-201ENST00000391042 103 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 Z82209.1-201ENST00000422141 2135 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 AC103975.1-201ENST00000482506 483 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 AC083906.5-201ENST00000503722 328 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU1-143P-201ENST00000516296 146 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 RN7SKP282-201ENST00000516824 299 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 AL390123.1-201ENST00000603216 237 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 AC116312.1-201ENST00000606841 314 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 U1.23-201ENST00000610293 146 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 AC010999.1-201ENST00000611856 324 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU1-68P-201ENST00000615382 146 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 U1.39-201ENST00000621562 146 ntBASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GTF3C3Q9Y5Q9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU6-1301P-201ENST00000362724 104 ntBASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU1-76P-201ENST00000362903 159 ntBASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 SET-203ENST00000372688 801 ntTSL 2 BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 DYNLT3P1-201ENST00000378574 347 ntBASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 Y_RNA.527-201ENST00000384573 102 ntBASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 U3.39-201ENST00000408569 239 ntBASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 AC090515.1-201ENST00000465295 476 ntBASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 Y_RNA.713-201ENST00000517013 96 ntBASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 AC093023.1-201ENST00000547375 507 ntBASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 UBL5P4-201ENST00000562584 236 ntBASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 AC004832.5-201ENST00000608677 401 ntBASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 AC018445.2-201ENST00000622987 260 ntBASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 AC008264.2-201ENST00000610193 3731 ntBASIC4.76□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU1-62P-201ENST00000362599 164 ntBASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU6-873P-201ENST00000363833 107 ntBASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 SNORD32B-201ENST00000364460 84 ntBASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU6-26P-201ENST00000383985 107 ntBASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 SNORA18.3-201ENST00000384122 132 ntBASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 MIR487A-201ENST00000385009 80 ntBASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 MIR95-201ENST00000385072 81 ntBASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU6-220P-201ENST00000390919 107 ntBASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 RNA5SP213-201ENST00000391031 106 ntBASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 AL357552.1-201ENST00000445254 415 ntBASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 MTND5P22-201ENST00000458380 195 ntBASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 RN7SKP49-201ENST00000516675 260 ntBASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.75□□□□□ -1.65
GTF3C3Q9Y5Q9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 Y_RNA.179-201ENST00000363844 90 ntBASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 RNA5SP366-201ENST00000365454 123 ntBASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU6-1274P-201ENST00000384557 107 ntBASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 MIR1252-201ENST00000408861 65 ntBASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 AC027124.2-201ENST00000428249 105 ntBASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 U8.22-201ENST00000459141 133 ntBASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 RN7SL354P-201ENST00000469282 294 ntBASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 RN7SL810P-201ENST00000493031 276 ntBASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU6-1137P-201ENST00000517073 99 ntBASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 SCARNA20.6-201ENST00000517251 106 ntBASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 AC018630.3-201ENST00000542637 96 ntBASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 AL355297.2-201ENST00000604792 129 ntBASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
GTF3C3Q9Y5Q9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 RNA5SP87-201ENST00000384155 118 ntBASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 Y_RNA.459-201ENST00000384251 102 ntBASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 Y_RNA.595-201ENST00000410403 105 ntBASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 AC092427.1-202ENST00000430569 476 ntBASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 RN7SL75P-201ENST00000461926 281 ntBASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 RPS23P5-201ENST00000495419 428 ntBASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 RNU2-44P-201ENST00000516795 194 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms