Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC022080.3-201ENST00000544433 482 ntBASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 AC023824.2-201ENST00000566185 400 ntBASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 RPS3AP23-202ENST00000574601 686 ntBASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 MIR3923-201ENST00000579521 83 ntBASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 MIR22-201ENST00000362190 85 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 RNU6-1297P-201ENST00000384415 104 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 Y_RNA.594-201ENST00000410373 140 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 RNU6-174P-201ENST00000410406 106 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 AC022028.1-201ENST00000412054 408 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 AL161788.1-201ENST00000441805 169 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 RN7SL20P-201ENST00000488827 297 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 RNU6-559P-201ENST00000516151 98 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 RPPH1-2P-201ENST00000516688 293 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 RN7SKP272-201ENST00000516988 232 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 MIR5690-201ENST00000583739 73 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 AC011494.1-201ENST00000596454 237 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 7SK.7-201ENST00000603504 247 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 AL138963.2-201ENST00000605137 226 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 AC009318.2-201ENST00000610917 651 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 AC093831.2-201ENST00000624393 3427 ntBASIC3.38□□□□□ -1.87
COL4A3BPQ9Y5P4 snoU2_19.1-201ENST00000362361 80 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 SNORA44-201ENST00000384584 132 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 Y_RNA.529-201ENST00000384586 119 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 RNU6-370P-201ENST00000411008 104 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 AC003685.2-201ENST00000422795 395 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 AC236972.1-201ENST00000433225 199 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 AL353705.4-201ENST00000449661 238 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 RNU6-277P-201ENST00000516272 106 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 SNORA31.16-201ENST00000516773 139 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 HSPE1P20-201ENST00000538133 289 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 AC005899.2-201ENST00000584353 90 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 Z98751.3-201ENST00000604447 521 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 AP000654.2-201ENST00000605633 586 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 AC009229.3-201ENST00000608056 282 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 AC137590.2-201ENST00000619709 240 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 AC069528.2-201ENST00000624849 1991 ntBASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.37□□□□□ -1.87
COL4A3BPQ9Y5P4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AC073325.2-201ENST00000339545 159 ntBASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 SNORD50.1-201ENST00000362987 71 ntBASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AC012306.1-201ENST00000423267 114 ntBASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 SNRPEP8-201ENST00000442866 260 ntBASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AL353752.1-201ENST00000454946 260 ntBASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AC090515.1-201ENST00000465295 476 ntBASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AC092185.1-201ENST00000491371 97 ntBASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 CYP4A27P-201ENST00000567218 190 ntBASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AC093732.2-201ENST00000607950 274 ntBASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AC133104.2-201ENST00000615272 193 ntBASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AC098657.3-201ENST00000620434 263 ntBASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 KPNA2P1-201ENST00000458289 1591 ntBASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.36□□□□□ -1.87
COL4A3BPQ9Y5P4 AC135776.4-201ENST00000624300 1904 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 Y_RNA.2-201ENST00000362330 96 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 RNU6-1059P-201ENST00000363752 98 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 SNORA29-201ENST00000384183 140 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 RPL21P75-201ENST00000396599 483 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 RPL21P28-201ENST00000401418 483 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 HMGB3P2-201ENST00000411913 584 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 AC079354.2-201ENST00000453523 154 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 RPL21P39-201ENST00000463605 483 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 AC087190.1-201ENST00000484462 480 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 AC093591.1-201ENST00000491435 481 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 RPL21P16-201ENST00000495531 483 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 RN7SKP43-201ENST00000516173 320 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 Y_RNA.670-201ENST00000516255 105 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 AL355375.2-201ENST00000574825 175 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 AL355297.2-201ENST00000604792 129 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 HMGB1P24-202ENST00000615653 685 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms