Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PCDHGA2Q9Y5H1 AC068647.1-201ENST00000489539 2265 ntBASIC3.38□□□□□ -1.87
PCDHGA2Q9Y5H1 AP000560.1-201ENST00000624150 1937 ntBASIC3.38□□□□□ -1.87
PCDHGA2Q9Y5H1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA2Q9Y5H1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA2Q9Y5H1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHGA2Q9Y5H1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 AC092268.1-201ENST00000342691 405 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 Y_RNA.364-201ENST00000365532 101 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 RNU6-1083P-201ENST00000384022 107 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 MTCYBP2-201ENST00000407745 171 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 RN7SKP61-201ENST00000410642 295 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 MTCYBP10-201ENST00000424905 650 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 AL357552.1-201ENST00000445254 415 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 RPL23AP67-201ENST00000465341 474 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 AC104564.1-201ENST00000493028 407 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 AC009812.2-201ENST00000517657 457 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 GNAI2P1-201ENST00000541815 315 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 TGIF1P1-201ENST00000558095 802 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 AC060766.3-201ENST00000591442 263 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 AC092447.9-201ENST00000603395 144 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 AP003122.5-201ENST00000527668 3766 ntBASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA2Q9Y5H1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 Y_RNA.80-201ENST00000362996 102 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 RNU6-700P-201ENST00000391043 107 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 AL512633.1-201ENST00000399931 655 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 CYCSP48-201ENST00000417124 323 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 AC009414.1-201ENST00000427200 443 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 RN7SKP210-201ENST00000459176 261 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 SNORA70.19-201ENST00000516717 90 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 RNU7-4P-201ENST00000516961 62 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 AL590705.4-201ENST00000532209 134 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 AC026333.2-201ENST00000542164 106 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 AC007375.1-201ENST00000554513 578 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 MIR3162-201ENST00000581818 82 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 AC137590.2-201ENST00000619709 240 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 AL021368.2-201ENST00000606125 5352 ntBASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA2Q9Y5H1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 AL109809.4-201ENST00000603520 2185 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 Y_RNA.314-201ENST00000365114 102 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 AP002088.1-201ENST00000382740 395 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 AL139095.1-201ENST00000404326 391 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 RNU2-23P-201ENST00000410545 195 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 AL139281.1-201ENST00000422120 335 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 AL160004.2-201ENST00000432935 350 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 AC004383.1-201ENST00000438135 289 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 AC105758.1-201ENST00000506038 399 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 SEM1P1-201ENST00000506694 209 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 RNU6-475P-201ENST00000516073 104 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 RNU4-77P-201ENST00000516692 156 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 SCARNA11.3-201ENST00000517276 130 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 AC004584.2-201ENST00000570407 410 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 AL162730.1-201ENST00000605734 292 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 MTND4P1-201ENST00000457501 1466 ntBASIC3.35□□□□□ -1.87
PCDHGA2Q9Y5H1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 MIR30E-201ENST00000362104 92 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 Y_RNA.39-201ENST00000362620 98 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 MIR625-201ENST00000385047 85 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 AC007098.1-201ENST00000420122 367 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 RN7SL863P-201ENST00000462370 296 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 AC010401.1-201ENST00000463867 348 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 HMGN1P10-201ENST00000474557 553 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 RPL36AP48-201ENST00000485521 314 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 RAC1P5-201ENST00000512182 576 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 RNU6-1137P-201ENST00000517073 99 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms