Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LARP7P3-201ENST00000579888 337 ntBASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 MIR5006-201ENST00000583027 110 ntBASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHB11Q9Y5F2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 CPHL1P-201ENST00000461341 3407 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 RNU4-15P-201ENST00000362613 141 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 RNU1-94P-201ENST00000362627 173 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 RNU6-1205P-201ENST00000363625 106 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 SNORD37.2-201ENST00000391075 66 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 SNORA48.7-201ENST00000391302 135 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 AC023141.4-201ENST00000412031 328 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 AC091179.1-201ENST00000461606 579 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 PARP4P3-201ENST00000510265 317 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 MIR3138-201ENST00000585238 82 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 AC069200.1-201ENST00000609511 323 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 AC114781.5-201ENST00000615297 108 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 ZYXP1-201ENST00000617638 118 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 U6.115-201ENST00000636045 103 ntBASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHB11Q9Y5F2 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 AL672296.1-201ENST00000427780 2158 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 SNORA18.2-201ENST00000383865 132 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 RNU6-643P-201ENST00000384018 107 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 U8.12-201ENST00000384701 133 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 HDGFP1-201ENST00000405943 252 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 AL365496.1-201ENST00000426885 215 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 RPL23AP82-202ENST00000427528 469 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 RPS29P17-201ENST00000430795 166 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 NDUFS5P3-201ENST00000450668 321 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 AC012671.1-201ENST00000451912 203 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 RNU7-141P-201ENST00000459304 62 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 AC091153.1-201ENST00000466297 402 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 RPS27P26-201ENST00000494583 239 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 RNU4-57P-201ENST00000515980 135 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 AC025281.1-201ENST00000567026 265 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 AC006133.1-201ENST00000617106 264 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 AC091905.2-201ENST00000623143 306 ntBASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHB11Q9Y5F2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 RNU6-407P-201ENST00000365280 104 ntBASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 MIR659-201ENST00000384963 97 ntBASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 MIR15B-201ENST00000385045 98 ntBASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 Z75741.1-201ENST00000446793 314 ntBASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 RPL7AP28-201ENST00000464513 571 ntBASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 RNA5SP154-201ENST00000516193 111 ntBASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 RNA5SP360-201ENST00000516555 118 ntBASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 MRPL49P2-201ENST00000521066 465 ntBASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 MIR3646-201ENST00000578301 84 ntBASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 AC012493.2-201ENST00000595083 291 ntBASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 HSPE1P7-201ENST00000604681 321 ntBASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 AL354798.1-201ENST00000622505 329 ntBASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PCDHB11Q9Y5F2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms