Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 RNU6-1012P-201ENST00000516606 109 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.706-201ENST00000516933 99 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 RN7SKP272-201ENST00000516988 232 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 SNORA31.19-201ENST00000517079 126 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-1073P-201ENST00000517182 106 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 AC022868.1-201ENST00000517767 391 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 AC091144.1-201ENST00000519573 138 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 AC024405.2-202ENST00000532731 184 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 MRPS36P4-201ENST00000534436 298 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 AC010186.2-204ENST00000537668 439 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 AC060766.3-201ENST00000591442 263 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 RPL23AP78-201ENST00000599928 470 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.772-201ENST00000606692 102 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 U6.105-201ENST00000637379 88 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 AL133383.2-201ENST00000622958 2336 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
PACSIN3Q9UKS6 HAUS6P2-201ENST00000433254 2404 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 DEFB108F-201ENST00000344638 222 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 RNA5SP387-201ENST00000364226 106 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 COX6CP10-201ENST00000416832 224 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 TOMM20P4-201ENST00000427861 435 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 RPL21P40-201ENST00000428586 483 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 Y_RNA.683-201ENST00000516508 93 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 RNA5SP290-201ENST00000517133 127 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 AP002392.1-201ENST00000537692 208 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 MIR3922-201ENST00000585192 84 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 AC010928.2-201ENST00000588017 287 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 U2.14-201ENST00000615943 113 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 AC073476.4-201ENST00000628409 72 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 AC017071.1-201ENST00000564407 2204 ntBASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PACSIN3Q9UKS6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 MIR411-201ENST00000362239 96 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 RNA5SP50-201ENST00000363731 107 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-682P-201ENST00000363843 106 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-173P-201ENST00000364215 104 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-926P-201ENST00000384075 107 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 MIR548I2-201ENST00000408348 149 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 RPL21P66-201ENST00000426566 466 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 ARF4P2-201ENST00000430209 526 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 HSPE1P25-201ENST00000455484 251 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AC092798.1-201ENST00000458542 409 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 snoU13.4-201ENST00000458916 104 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 RN7SL330P-201ENST00000469709 307 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AL160314.1-201ENST00000490836 438 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 SCARNA15.2-201ENST00000516409 127 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-572P-201ENST00000516724 80 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AC109479.2-201ENST00000517842 174 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AC022559.1-201ENST00000520905 205 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 MIR3690-201ENST00000580266 75 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AC090132.2-201ENST00000615881 347 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 U4.7-201ENST00000638126 106 ntBASIC3.2□□□□□ -1.9
PACSIN3Q9UKS6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-600P-201ENST00000362524 99 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-1301P-201ENST00000362724 104 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 Y_RNA.333-201ENST00000365274 102 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 RNU6-1140P-201ENST00000410517 106 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 MTATP6P29-201ENST00000415057 132 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 VDAC1P3-201ENST00000434069 851 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 AC115115.1-201ENST00000449927 248 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 U3.44-201ENST00000458938 192 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 RNU7-120P-201ENST00000459334 63 ntBASIC3.19□□□□□ -1.9
PACSIN3Q9UKS6 RPS26P21-201ENST00000475397 348 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms