Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC015813.4-201ENST00000610469 179 ntBASIC3.93□□□□□ -1.78
FOXD3Q9UJU5 AC007546.2-201ENST00000623996 360 ntBASIC3.93□□□□□ -1.78
FOXD3Q9UJU5 AC140479.6-201ENST00000633535 357 ntBASIC3.93□□□□□ -1.78
FOXD3Q9UJU5 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
FOXD3Q9UJU5 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXD3Q9UJU5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXD3Q9UJU5 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
FOXD3Q9UJU5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXD3Q9UJU5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXD3Q9UJU5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXD3Q9UJU5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXD3Q9UJU5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXD3Q9UJU5 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
FOXD3Q9UJU5 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 Y_RNA.23-201ENST00000362496 106 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 Y_RNA.75-201ENST00000362927 97 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 Y_RNA.238-201ENST00000364441 102 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 RNA5SP479-201ENST00000364858 117 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 RNA5SP22-201ENST00000365393 109 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 RNU6-81P-201ENST00000365608 104 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 AP000567.1-201ENST00000406413 156 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 RNU5E-9P-201ENST00000411164 104 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 MTATP6P29-201ENST00000415057 132 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 AL365496.1-201ENST00000426885 215 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 AC136628.3-201ENST00000521868 290 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 AC079598.5-201ENST00000547460 117 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 VN1R85P-201ENST00000601587 426 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 ZYXP1-201ENST00000617638 118 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 MIR492-201ENST00000638676 116 ntBASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
FOXD3Q9UJU5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 AL136164.4-201ENST00000625013 2135 ntBASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 SNORD115-30-201ENST00000364117 82 ntBASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 SNORA18.2-201ENST00000383865 132 ntBASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 RNA5SP504-201ENST00000410676 117 ntBASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 Z75741.1-201ENST00000446793 314 ntBASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 RPS27AP9-201ENST00000477681 438 ntBASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 RNA5SP73-201ENST00000516744 108 ntBASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 DEFB131C-201ENST00000528817 165 ntBASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 AC079587.1-201ENST00000603846 277 ntBASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 AL160290.3-201ENST00000604869 165 ntBASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 AL391261.4-201ENST00000616012 481 ntBASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 AC034229.5-201ENST00000624258 185 ntBASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 MAPK10-372ENST00000641954 3413 ntBASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXD3Q9UJU5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
FOXD3Q9UJU5 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
FOXD3Q9UJU5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
FOXD3Q9UJU5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
FOXD3Q9UJU5 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
FOXD3Q9UJU5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
FOXD3Q9UJU5 MIR383-201ENST00000362257 73 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 U3.8-201ENST00000363675 217 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 Y_RNA.243-201ENST00000364481 109 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 RNU6-763P-201ENST00000390865 106 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 AL031003.1-201ENST00000404229 172 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 RN7SKP27-201ENST00000410684 333 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 HMGN2P20-201ENST00000437531 273 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 AC069285.2-201ENST00000440210 275 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 RN7SL41P-201ENST00000476144 297 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 SNORA31.1-201ENST00000515993 133 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 SNORA31.5-201ENST00000516190 133 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 RNU2-44P-201ENST00000516795 194 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 AC100767.1-201ENST00000528178 123 ntBASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXD3Q9UJU5 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms