Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NXF1Q9UBU9 AL359693.1-201ENST00000614959 2407 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 RNU1-15P-201ENST00000353977 144 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 RNU6-1285P-201ENST00000363480 105 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 RNU6-1134P-201ENST00000365156 101 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 Y_RNA.368-201ENST00000365547 113 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 MIR670-201ENST00000390142 98 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 RNU6-788P-201ENST00000390967 104 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 AL031003.1-201ENST00000404229 172 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 SNRPGP8-201ENST00000454064 226 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 AP000705.1-201ENST00000454567 350 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 UBE2CP3-201ENST00000502715 450 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 ATP5EP1-201ENST00000510257 156 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 SCARNA13-201ENST00000516672 275 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 CYCSP29-201ENST00000533731 318 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 SNORD115-40-201ENST00000606510 82 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 SNX18P1Y-201ENST00000616231 511 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 MALAT1.1-201ENST00000618249 95 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 MIR3653-201ENST00000625572 110 ntBASIC4.57□□□□□ -1.68
NXF1Q9UBU9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NXF1Q9UBU9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NXF1Q9UBU9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NXF1Q9UBU9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NXF1Q9UBU9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NXF1Q9UBU9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.56□□□□□ -1.68
NXF1Q9UBU9 MIR383-201ENST00000362257 73 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 RNU6-978P-201ENST00000364371 103 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 SNORA70.4-201ENST00000365509 134 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.56□□□□□ -1.68
NXF1Q9UBU9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.56□□□□□ -1.68
NXF1Q9UBU9 GPM6BP3-201ENST00000442797 145 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 RPL39P34-201ENST00000477141 156 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 RPS29P19-201ENST00000479709 171 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 AL592156.1-201ENST00000508758 304 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 RNA5SP73-201ENST00000516744 108 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 AC026421.1-201ENST00000519101 163 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 IGLV3-26-201ENST00000520756 302 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.56□□□□□ -1.68
NXF1Q9UBU9 IGKV1-22-201ENST00000524313 326 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 AC107918.3-201ENST00000533272 382 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.56□□□□□ -1.68
NXF1Q9UBU9 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NXF1Q9UBU9 AC080128.1-201ENST00000474389 1917 ntBASIC4.56□□□□□ -1.68
NXF1Q9UBU9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NXF1Q9UBU9 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 RNU6-727P-201ENST00000363592 107 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 Y_RNA.341-201ENST00000365341 102 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 MIR1263-201ENST00000408324 86 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 SNORA79-201ENST00000408376 140 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 RNU6-710P-201ENST00000410424 105 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 RNU2-32P-201ENST00000411193 191 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 AC010531.2-201ENST00000465012 153 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 HSPE1P6-201ENST00000479457 291 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 AC021205.2-201ENST00000480069 347 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 SNORA31.9-201ENST00000516429 84 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 AC107016.1-201ENST00000550463 337 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 FAM27D1-201ENST00000612308 341 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 ZYXP1-201ENST00000617638 118 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.55□□□□□ -1.68
NXF1Q9UBU9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.55□□□□□ -1.68
NXF1Q9UBU9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.54□□□□□ -1.68
NXF1Q9UBU9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.54□□□□□ -1.68
NXF1Q9UBU9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.54□□□□□ -1.68
NXF1Q9UBU9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NXF1Q9UBU9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.54□□□□□ -1.68
NXF1Q9UBU9 SNORD115-30-201ENST00000364117 82 ntBASIC4.54□□□□□ -1.68
NXF1Q9UBU9 Y_RNA.310-201ENST00000365063 113 ntBASIC4.54□□□□□ -1.68
NXF1Q9UBU9 RNU6-144P-201ENST00000383951 107 ntBASIC4.54□□□□□ -1.68
NXF1Q9UBU9 MIR590-201ENST00000385008 97 ntBASIC4.54□□□□□ -1.68
NXF1Q9UBU9 MIR549A-201ENST00000385268 96 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms