Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 uc_338.5-201ENST00000611839 155 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AL008636.1-201ENST00000625038 1018 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 MIR1291-201ENST00000627649 87 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 U4.7-201ENST00000638126 106 ntBASIC2.26□□□□□ -2.05
NDE1Q9NXR1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.26□□□□□ -2.05
NDE1Q9NXR1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
NDE1Q9NXR1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
NDE1Q9NXR1 SNORD56.1-201ENST00000362913 68 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 Y_RNA.166-201ENST00000363730 102 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 SNORA80A-201ENST00000363922 136 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 RNU6-336P-201ENST00000364891 107 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 Y_RNA.356-201ENST00000365475 113 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NDE1Q9NXR1 SNORD116-11-201ENST00000383882 92 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 RNU6-306P-201ENST00000384617 107 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 RNU6-95P-201ENST00000384697 107 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 RNU6-19P-201ENST00000384718 107 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 PTGES3P4-201ENST00000426243 356 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AC004383.1-201ENST00000438135 289 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.25□□□□□ -2.05
NDE1Q9NXR1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AL139109.1-201ENST00000455491 297 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AC130509.1-201ENST00000464158 433 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 MED28P2-201ENST00000475771 317 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AC097462.2-201ENST00000504623 481 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AC079140.5-201ENST00000507882 310 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AK3P2-201ENST00000507976 429 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.25□□□□□ -2.05
NDE1Q9NXR1 RNU6-377P-201ENST00000515965 102 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AC105029.1-201ENST00000520250 669 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AC009127.3-201ENST00000570531 403 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 AP000553.5-201ENST00000641933 54 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.25□□□□□ -2.05
NDE1Q9NXR1 MTND4P1-201ENST00000457501 1466 ntBASIC2.25□□□□□ -2.05
NDE1Q9NXR1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NDE1Q9NXR1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 RNU6-527P-201ENST00000363425 104 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 RNU6-128P-201ENST00000383976 107 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 Y_RNA.529-201ENST00000384586 119 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 AL359511.1-201ENST00000402970 211 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 HMGB3P2-201ENST00000411913 584 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 MTND1P11-201ENST00000456661 876 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 AC018437.1-201ENST00000492214 406 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 MTCYBP40-201ENST00000509390 1135 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 AC096745.1-201ENST00000509945 370 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 SNORA25.11-201ENST00000515935 105 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 SNORA31.6-201ENST00000516241 130 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 TRAV32-201ENST00000553993 340 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 AC009314.1-201ENST00000603871 304 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 AC244517.12-201ENST00000623581 663 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 AC092608.2-201ENST00000624427 218 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 AC112487.2-201ENST00000637950 304 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
NDE1Q9NXR1 RBBP8P1-201ENST00000449447 1844 ntBASIC2.24□□□□□ -2.05
NDE1Q9NXR1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.23□□□□□ -2.05
NDE1Q9NXR1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
NDE1Q9NXR1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NDE1Q9NXR1 Y_RNA.151-201ENST00000363566 112 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 RNU6-105P-201ENST00000363909 104 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 Y_RNA.473-201ENST00000384333 102 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 MIR147B-201ENST00000390185 80 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NDE1Q9NXR1 RNU4-14P-201ENST00000410858 122 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 RNU6-325P-201ENST00000411132 105 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 RNU6-1304P-201ENST00000411374 106 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 RPS3AP52-201ENST00000435639 297 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NDE1Q9NXR1 AC093019.1-201ENST00000443135 252 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 MTND1P17-201ENST00000448961 204 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 AP001324.2-201ENST00000461163 319 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 MTND5P5-201ENST00000503764 376 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.23□□□□□ -2.05
NDE1Q9NXR1 GLYCAM1-201ENST00000546596 285 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.23□□□□□ -2.05
NDE1Q9NXR1 AC007151.1-201ENST00000572774 483 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 RPS3AP23-202ENST00000574601 686 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms