Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AL135790.2-201ENST00000437701 267 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AP000705.1-201ENST00000454567 350 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AC245047.8-201ENST00000456455 284 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 RPL26P9-201ENST00000457466 433 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 snoU13.6-201ENST00000458785 104 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AC108751.2-201ENST00000469993 231 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 RN7SL812P-201ENST00000493791 279 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AC146944.2-203ENST00000502493 354 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AC139495.1-202ENST00000513164 354 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AC026402.1-201ENST00000513642 170 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 RNU1-103P-201ENST00000516502 125 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AC007224.1-201ENST00000564410 144 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AC108081.1-201ENST00000604358 221 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AL138880.2-201ENST00000616214 239 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 AC021146.4-201ENST00000309229 279 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 RNU6-235P-201ENST00000362644 107 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 SNORD56.1-201ENST00000362913 68 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 RNA5SP28-201ENST00000363841 119 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 Z98749.2-208ENST00000381646 500 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 SNORA36A-201ENST00000384221 132 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 Y_RNA.572-201ENST00000384757 98 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 RNU4-43P-201ENST00000410628 137 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 AL162591.2-201ENST00000449634 317 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 AC146507.2-201ENST00000460608 476 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 AC010618.1-201ENST00000469924 477 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 UQCRHP4-201ENST00000471686 272 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 RPL23AP70-201ENST00000483361 460 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 RPL31P61-201ENST00000496160 376 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 AP000867.2-201ENST00000532468 320 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 AC011944.2-201ENST00000624440 683 ntBASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CUEDC1Q9NWM3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 RNU6-1048P-201ENST00000364054 107 ntBASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 SNORD116-21-201ENST00000384507 92 ntBASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 Z98745.1-201ENST00000402553 494 ntBASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 RPL26P27-201ENST00000414397 437 ntBASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 AL451050.1-201ENST00000450126 415 ntBASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 SCARNA10-201ENST00000459255 330 ntBASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 MIR4474-201ENST00000579189 78 ntBASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 VN1R85P-201ENST00000601587 426 ntBASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 snoZ196.1-201ENST00000625269 89 ntBASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 MAPK10-320ENST00000641462 6696 ntBASIC4.43□□□□□ -1.7
CUEDC1Q9NWM3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 RNA5SP447-201ENST00000363749 119 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 U3.9-201ENST00000363823 204 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 SNORD113.2-201ENST00000364166 89 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 RNA5SP515-201ENST00000364570 118 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 Y_RNA.280-201ENST00000364765 112 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 SNORA71.2-201ENST00000364941 134 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 Y_RNA.368-201ENST00000365547 113 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 RNU6-597P-201ENST00000365620 102 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 RNU1-73P-201ENST00000383971 164 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 MIR544A-201ENST00000384855 91 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 MIR659-201ENST00000384963 97 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 Y_RNA.584-201ENST00000391090 114 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 MIR320B2-201ENST00000408479 138 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 Z74021.1-201ENST00000423610 407 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 RPL39P29-201ENST00000447779 157 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 SNRPGP7-201ENST00000469016 106 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 SNORD33.1-201ENST00000516213 88 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 MIR2116-201ENST00000517221 80 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 AC090142.3-201ENST00000519012 385 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 AL359198.2-201ENST00000611836 194 ntBASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CUEDC1Q9NWM3 AC106871.1-201ENST00000568324 3102 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms