Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 Y_RNA.40-201ENST00000362645 93 ntBASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 Y_RNA.52-201ENST00000362760 96 ntBASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 RNU6-1131P-201ENST00000364955 107 ntBASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 MIR624-201ENST00000385217 97 ntBASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 RNU2-70P-201ENST00000410718 179 ntBASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 RPS23P1-201ENST00000491662 432 ntBASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 AC091868.1-201ENST00000508746 304 ntBASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 SNORD77.4-201ENST00000516158 81 ntBASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 SNORA40.13-201ENST00000516379 120 ntBASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 RNU6-126P-201ENST00000516685 103 ntBASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 AC009831.4-201ENST00000620744 325 ntBASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 AC026241.1-201ENST00000517873 2142 ntBASIC4.51□□□□□ -1.69
PRDM9Q9NQV7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 SNORD12C-201ENST00000386307 89 ntBASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 MIR891A-201ENST00000401237 79 ntBASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 RPL36AP10-201ENST00000421785 322 ntBASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 AL445584.1-201ENST00000431451 330 ntBASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 AL121890.1-201ENST00000435457 205 ntBASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 RPS26P2-201ENST00000440331 348 ntBASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 AC084357.1-201ENST00000473404 255 ntBASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 AC134698.5-201ENST00000519444 336 ntBASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 AC112484.5-201ENST00000624189 228 ntBASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 AC007496.3-201ENST00000624987 3443 ntBASIC4.5□□□□□ -1.69
PRDM9Q9NQV7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 SNORA27.1-201ENST00000362604 124 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 U3.15-201ENST00000365398 212 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 SNORA51.5-201ENST00000384126 131 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 RNU6-49P-201ENST00000384256 107 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 MIR570-201ENST00000384917 97 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 RNA5SP127-201ENST00000411051 133 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 AC105137.1-201ENST00000484355 562 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 AC078918.1-201ENST00000498515 228 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 PRELID2P1-201ENST00000552837 301 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 AC007012.1-201ENST00000567192 175 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 MIR4700-201ENST00000578311 74 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 MIR4270-201ENST00000581799 70 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 AC012493.2-201ENST00000595083 291 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 AL049861.1-201ENST00000603130 150 ntBASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PRDM9Q9NQV7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 SALL4P2-201ENST00000423288 2910 ntBASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 RNU6-529P-201ENST00000363383 104 ntBASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 Y_RNA.634-201ENST00000364811 113 ntBASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 RNA5SP125-201ENST00000364843 120 ntBASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 RNU6-1113P-201ENST00000384348 107 ntBASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 Y_RNA.544-201ENST00000384650 113 ntBASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 MIR921-201ENST00000401133 56 ntBASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 AL355796.1-201ENST00000406706 323 ntBASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 RN7SKP267-201ENST00000410381 285 ntBASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 RPS3AP1-201ENST00000413190 320 ntBASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 AC016831.4-201ENST00000438302 307 ntBASIC4.48□□□□□ -1.69
PRDM9Q9NQV7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms