Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AC138393.1-203ENST00000327086 343 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 RNU6-486P-201ENST00000363116 107 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 RNU6-529P-201ENST00000363383 104 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 RNU6-266P-201ENST00000364225 107 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AL606923.1-201ENST00000406616 190 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 RNU6-1068P-201ENST00000410958 103 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 OR9R1P-201ENST00000412200 877 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 EIF4EP4-201ENST00000424916 578 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 TOMM20P4-201ENST00000427861 435 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AC007969.2-201ENST00000441891 191 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.1□□□□□ -2.07
RNF41Q9H4P4 MTND3P16-201ENST00000452205 344 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AL441985.1-201ENST00000457727 251 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 RPL23AP63-201ENST00000498752 471 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AC008526.1-201ENST00000509149 338 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.1□□□□□ -2.07
RNF41Q9H4P4 RNA5SP112-201ENST00000515937 99 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 RNA5SP364-201ENST00000516938 78 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.1□□□□□ -2.07
RNF41Q9H4P4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.1□□□□□ -2.07
RNF41Q9H4P4 MIR4419B-201ENST00000577260 68 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 MIR5571-201ENST00000577998 113 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AC090897.2-201ENST00000581715 130 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AC009233.1-201ENST00000616477 371 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.1□□□□□ -2.07
RNF41Q9H4P4 AC084768.2-201ENST00000622736 221 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 MIR1321-201ENST00000637766 79 ntBASIC2.1□□□□□ -2.07
RNF41Q9H4P4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
RNF41Q9H4P4 RNU6-1010P-201ENST00000362757 107 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 SNORA38-201ENST00000363946 132 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 RNU6-82P-201ENST00000363970 107 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 Y_RNA.378-201ENST00000365652 113 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 MIR181A1-201ENST00000385026 110 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.09□□□□□ -2.07
RNF41Q9H4P4 RPS3AP44-201ENST00000425466 790 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.09□□□□□ -2.07
RNF41Q9H4P4 AL139109.1-201ENST00000455491 297 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 SMURF2P1-201ENST00000514992 481 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 RNU6-1038P-201ENST00000516516 104 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 RNU6-314P-201ENST00000516574 104 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RNF41Q9H4P4 AC109329.1-201ENST00000518744 317 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 COPS8P3-201ENST00000526024 482 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 CENPUP1-201ENST00000526649 1202 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.09□□□□□ -2.07
RNF41Q9H4P4 AL157687.1-201ENST00000554853 619 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.09□□□□□ -2.07
RNF41Q9H4P4 AC069294.1-201ENST00000608397 350 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 AC245884.12-201ENST00000615364 59 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 AC103705.1-201ENST00000619013 241 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 AC241585.2-209ENST00000638217 143 ntBASIC2.09□□□□□ -2.07
RNF41Q9H4P4 Y_RNA.38-201ENST00000362617 102 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 RNU5E-7P-201ENST00000365290 117 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 AL355497.1-201ENST00000406262 551 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 AL590002.1-201ENST00000406554 418 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 RNA5SP390-201ENST00000410191 113 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.08□□□□□ -2.08
RNF41Q9H4P4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.08□□□□□ -2.08
RNF41Q9H4P4 AC003685.2-201ENST00000422795 395 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 AC008267.5-201ENST00000424928 265 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.08□□□□□ -2.08
RNF41Q9H4P4 AC117503.1-201ENST00000472241 394 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 RN7SL274P-201ENST00000492268 272 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 RPL22P13-201ENST00000493291 347 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RNF41Q9H4P4 RNU6-1281P-201ENST00000516223 105 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 MIR3618-201ENST00000580330 88 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 AC105245.1-201ENST00000581934 244 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 MIR3941-201ENST00000582572 103 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 VN1R80P-201ENST00000597126 338 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 SNORD14A-201ENST00000606526 91 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RNF41Q9H4P4 U2.17-201ENST00000611454 95 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 AL159153.1-201ENST00000619688 317 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 AC068137.3-201ENST00000639191 341 ntBASIC2.08□□□□□ -2.08
RNF41Q9H4P4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
RNF41Q9H4P4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
RNF41Q9H4P4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RNF41Q9H4P4 Y_RNA.40-201ENST00000362645 93 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 SNORD56.1-201ENST00000362913 68 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 RNU6-105P-201ENST00000363909 104 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 RNU6-1090P-201ENST00000364065 94 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 RNU6-522P-201ENST00000364497 107 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RNF41Q9H4P4 U3.40-201ENST00000408706 208 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 POLHP1-201ENST00000411806 470 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.07□□□□□ -2.08
RNF41Q9H4P4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.07□□□□□ -2.08
RNF41Q9H4P4 AL645568.3-201ENST00000433683 316 ntBASIC2.07□□□□□ -2.08
RNF41Q9H4P4 AL121601.2-201ENST00000438019 707 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms