Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR549A-201ENST00000385268 96 ntBASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 RNU6-855P-201ENST00000410395 104 ntBASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 AL590399.6-201ENST00000446396 307 ntBASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 AC006445.2-201ENST00000510061 472 ntBASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 RN7SKP234-201ENST00000517173 224 ntBASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 PRELID2P1-201ENST00000552837 301 ntBASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 MIR8058-201ENST00000615737 89 ntBASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 AC009831.4-201ENST00000620744 325 ntBASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 AC073073.2-201ENST00000609827 2578 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 Y_RNA.85-201ENST00000363014 111 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 Z98749.2-208ENST00000381646 500 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 MIR518D-201ENST00000385014 87 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 RNU6-383P-201ENST00000410864 94 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 Y_RNA.622-201ENST00000411091 108 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 AC012306.1-201ENST00000423267 114 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 AC007919.1-201ENST00000429380 217 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 PTMAP3-201ENST00000447474 330 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 SNRPGP8-201ENST00000454064 226 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 RNU6-1256P-201ENST00000516539 103 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 Y_RNA.690-201ENST00000516603 95 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 AL121603.1-201ENST00000553815 142 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 MIR4472-2-201ENST00000582069 67 ntBASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL25A1Q9BXS0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 SNORD56.1-201ENST00000362913 68 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 RNU6-978P-201ENST00000364371 103 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 RNU6-136P-201ENST00000384663 107 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 RNU6-813P-201ENST00000384691 107 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 AL035423.1-201ENST00000420331 213 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 AC078809.1-201ENST00000427601 140 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 AC079780.1-201ENST00000428259 207 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 AL356867.1-201ENST00000429623 299 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 HMGB1P37-201ENST00000439613 609 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 KC877373.1-201ENST00000479066 408 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 RN7SKP43-201ENST00000516173 320 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 RNU6-970P-201ENST00000516312 107 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 CYP4A27P-201ENST00000567218 190 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 AC131055.1-201ENST00000584626 316 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 U73479.1-201ENST00000618062 168 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 AC006386.2-201ENST00000624491 75 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 AC012005.1-201ENST00000624575 75 ntBASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL25A1Q9BXS0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
COL25A1Q9BXS0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 AC092268.1-201ENST00000342691 405 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 DEFB108F-201ENST00000344638 222 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 RNU6-508P-201ENST00000363231 103 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 MIR544A-201ENST00000384855 91 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 MIR450A2-201ENST00000385022 100 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 SNORA68.2-201ENST00000391263 128 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 SNORA79-201ENST00000408376 140 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 GEMIN8P3-201ENST00000445417 720 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 RPL23AP14-201ENST00000468281 468 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 ENPP7P11-201ENST00000505915 627 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 Vault.1-201ENST00000516474 102 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 MIR4672-201ENST00000583126 81 ntBASIC4.33□□□□□ -1.72
COL25A1Q9BXS0 MIR7853-201ENST00000584820 132 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms