Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HPS3Q969F9 MIR422A-201ENST00000362286 90 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 Y_RNA.813-201ENST00000364639 102 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 SNORD32A-201ENST00000364805 84 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 SNORA51.4-201ENST00000364993 124 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 SNORA26.7-201ENST00000391288 122 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.25□□□□□ -1.89
HPS3Q969F9 AF228730.4-201ENST00000421457 183 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 MTCO3P10-201ENST00000455912 772 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 AC104564.1-201ENST00000493028 407 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 AC016632.1-201ENST00000503994 196 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.25□□□□□ -1.89
HPS3Q969F9 RNA5SP341-201ENST00000516261 117 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 RNU6-264P-201ENST00000517134 104 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.25□□□□□ -1.89
HPS3Q969F9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.25□□□□□ -1.89
HPS3Q969F9 MIR6852-201ENST00000621699 66 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 AL355596.1-201ENST00000565399 3996 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HPS3Q969F9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.25□□□□□ -1.89
HPS3Q969F9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.25□□□□□ -1.89
HPS3Q969F9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.24□□□□□ -1.89
HPS3Q969F9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
HPS3Q969F9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HPS3Q969F9 RNU6-212P-201ENST00000362642 104 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 RNU6-331P-201ENST00000384724 107 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 Y_RNA.579-201ENST00000390939 94 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 SNORA75.6-201ENST00000391318 127 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.24□□□□□ -1.89
HPS3Q969F9 AC097463.2-201ENST00000421074 142 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 BX276092.3-201ENST00000424182 230 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 RPL23AP95-201ENST00000426806 265 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 AC078809.1-201ENST00000427601 140 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 AC244505.4-201ENST00000434905 287 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 SSXP5-201ENST00000443473 287 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 S100A11P2-201ENST00000467589 312 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 RPS29P26-201ENST00000477483 171 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 FO393415.2-201ENST00000480085 343 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.24□□□□□ -1.89
HPS3Q969F9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.24□□□□□ -1.89
HPS3Q969F9 AC093303.1-201ENST00000514549 295 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 RNA5SP112-201ENST00000515937 99 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 SCARNA17.1-201ENST00000516211 143 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 SNORA31.6-201ENST00000516241 130 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 SCARNA17.2-201ENST00000516334 143 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 SCARNA16.2-201ENST00000516520 172 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 AC079598.5-201ENST00000547460 117 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
HPS3Q969F9 7SK.7-201ENST00000603504 247 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 SCARNA17.4-201ENST00000614296 143 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 AC090971.5-201ENST00000621102 293 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 AC092608.2-201ENST00000624427 218 ntBASIC3.24□□□□□ -1.89
HPS3Q969F9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.24□□□□□ -1.89
HPS3Q969F9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HPS3Q969F9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HPS3Q969F9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HPS3Q969F9 AL035425.3-201ENST00000564206 4996 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 AC092268.1-201ENST00000342691 405 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HPS3Q969F9 SNORD21-201ENST00000383953 95 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 SNORA41-201ENST00000384675 132 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 AL138885.1-201ENST00000405921 675 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 RNU6-1140P-201ENST00000410517 106 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 RN7SKP61-201ENST00000410642 295 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 RN7SKP58-201ENST00000411010 305 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 AC244670.1-201ENST00000436879 112 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 RPS29P6-201ENST00000438196 145 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 AC009296.1-201ENST00000443146 155 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.23□□□□□ -1.89
HPS3Q969F9 UBE2DNL-203ENST00000474922 222 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 AC027575.1-201ENST00000481064 460 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 RNA5SP384-201ENST00000516615 116 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 EIF4BP1-201ENST00000554881 351 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.23□□□□□ -1.89
HPS3Q969F9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.23□□□□□ -1.89
HPS3Q969F9 MIR4719-201ENST00000585233 84 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 AC073410.2-201ENST00000603240 332 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 HMGB1P24-202ENST00000615653 685 ntBASIC3.23□□□□□ -1.89
HPS3Q969F9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HPS3Q969F9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HPS3Q969F9 ZNF299P-201ENST00000406845 1804 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 OR56A5-201ENST00000340110 738 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 RNU6-890P-201ENST00000384121 107 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 Y_RNA.504-201ENST00000384481 104 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 Y_RNA.510-201ENST00000384511 114 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 MIR181A2-201ENST00000384863 110 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 MIR181B1-201ENST00000385240 110 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 CYCSP48-201ENST00000417124 323 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 AL139281.1-201ENST00000422120 335 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 MTND1P14-201ENST00000427400 950 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 RPL23AP58-201ENST00000440453 469 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 AC011816.1-201ENST00000441346 546 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 AL513124.1-201ENST00000450410 614 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 AC005741.1-201ENST00000511094 432 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.22□□□□□ -1.89
HPS3Q969F9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.22□□□□□ -1.89
HPS3Q969F9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.22□□□□□ -1.89
HPS3Q969F9 AC016256.1-201ENST00000547971 354 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 AC009318.2-201ENST00000610917 651 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms