Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 MTND3P25-201ENST00000509243 135 ntBASIC1.09□□□□□ -2.23
ZIC4Q8N9L1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.09□□□□□ -2.23
ZIC4Q8N9L1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.09□□□□□ -2.23
ZIC4Q8N9L1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.09□□□□□ -2.23
ZIC4Q8N9L1 MIR3136-201ENST00000583498 78 ntBASIC1.09□□□□□ -2.23
ZIC4Q8N9L1 AC022306.3-201ENST00000619930 550 ntBASIC1.09□□□□□ -2.23
ZIC4Q8N9L1 AC097372.5-201ENST00000623665 376 ntBASIC1.09□□□□□ -2.23
ZIC4Q8N9L1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
ZIC4Q8N9L1 RNU6-1285P-201ENST00000363480 105 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 RNU6-112P-201ENST00000363599 104 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 RNU6-105P-201ENST00000363909 104 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 RNU4-56P-201ENST00000364700 142 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 RPL23AP32-201ENST00000395315 459 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AC123900.1-201ENST00000420390 96 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AL512286.1-201ENST00000439244 400 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 MTND2P4-201ENST00000445034 1004 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AC245517.4-201ENST00000448601 281 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AC116562.3-201ENST00000506136 177 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AC074344.1-201ENST00000512823 224 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AC108729.3-201ENST00000513484 108 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 RNA5SP445-201ENST00000515889 115 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 MIR449C-201ENST00000516047 92 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 Y_RNA.672-201ENST00000516289 104 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AC068587.5-201ENST00000528506 175 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AC073539.2-201ENST00000597113 165 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 PRR13P7-201ENST00000605538 430 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AP000240.1-201ENST00000609910 452 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AL157834.3-201ENST00000615543 103 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AC138649.3-201ENST00000622154 254 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 AC120349.3-201ENST00000624377 529 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 Z69720.2-201ENST00000624755 279 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 SNORD98-201ENST00000636377 67 ntBASIC1.08□□□□□ -2.24
ZIC4Q8N9L1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 AL391987.6-201ENST00000305671 199 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 Y_RNA.22-201ENST00000362492 102 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 RNU4-15P-201ENST00000362613 141 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 RNU6-142P-201ENST00000384019 107 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 EBAG9P1-201ENST00000418955 543 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 AC000111.3-201ENST00000433478 193 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 AC015922.2-201ENST00000435593 184 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 AL121601.2-201ENST00000438019 707 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 AC092473.1-201ENST00000441098 221 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 USP9YP12-201ENST00000450481 570 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 ART2BP-201ENST00000453501 499 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 AL049829.1-201ENST00000465411 156 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 RPL36AP21-201ENST00000490372 323 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 AC104806.1-201ENST00000508720 308 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 RNU6-377P-201ENST00000515965 102 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 AC090821.2-201ENST00000523552 176 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 AP003034.1-201ENST00000534621 422 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 AC087883.1-201ENST00000551882 391 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 MIR4498-201ENST00000577599 66 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 AC112191.3-201ENST00000604371 277 ntBASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.07□□□□□ -2.24
ZIC4Q8N9L1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 SNORA20.2-201ENST00000383922 131 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 SNORA12-201ENST00000391162 147 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 RNU2-3P-201ENST00000410144 191 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 MTCO3P41-201ENST00000414801 328 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 RPL21P111-201ENST00000418453 477 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 MTND5P25-201ENST00000430499 799 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 FTH1P12-201ENST00000432137 551 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 UBE2V1P8-201ENST00000437166 265 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AC097473.1-201ENST00000508142 408 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AC104136.1-201ENST00000512969 394 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 RNU6-902P-201ENST00000517212 91 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 SUMO2P18-201ENST00000518873 252 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AC022616.3-201ENST00000523940 148 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AP003461.1-201ENST00000528866 78 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AC022878.1-201ENST00000530684 149 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 ELOCP32-201ENST00000548625 324 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 MIR5094-201ENST00000578766 85 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 HMGN1P30-201ENST00000589286 268 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AL590229.1-201ENST00000603497 542 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AL451064.1-201ENST00000607718 471 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AC027807.2-201ENST00000616099 408 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms