Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.14□□□□□ -1.59
EFCAB3Q8N7B9 RNA5SP310-201ENST00000459084 116 ntBASIC5.14□□□□□ -1.59
EFCAB3Q8N7B9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.14□□□□□ -1.59
EFCAB3Q8N7B9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC5.14□□□□□ -1.59
EFCAB3Q8N7B9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC5.14□□□□□ -1.59
EFCAB3Q8N7B9 MIR4472-2-201ENST00000582069 67 ntBASIC5.14□□□□□ -1.59
EFCAB3Q8N7B9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
EFCAB3Q8N7B9 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.14□□□□□ -1.59
EFCAB3Q8N7B9 OR51H2P-202ENST00000641424 3046 ntBASIC5.14□□□□□ -1.59
EFCAB3Q8N7B9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
EFCAB3Q8N7B9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
EFCAB3Q8N7B9 PCAT14-202ENST00000627127 3935 ntBASIC5.14□□□□□ -1.59
EFCAB3Q8N7B9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 SNORA31-201ENST00000362607 130 ntBASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 Y_RNA.107-201ENST00000363190 121 ntBASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 SNORD61-201ENST00000384252 73 ntBASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 AC006463.2-201ENST00000473326 348 ntBASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 RNU6-240P-201ENST00000516098 97 ntBASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 RNU6-65P-201ENST00000516332 98 ntBASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 AC000068.2-201ENST00000608816 460 ntBASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 MIR6839-201ENST00000620425 113 ntBASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
EFCAB3Q8N7B9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 RNA5SP307-201ENST00000362863 116 ntBASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 RNU1-22P-201ENST00000363334 158 ntBASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 RNU6-750P-201ENST00000390946 107 ntBASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 SRSF1P1-201ENST00000424058 520 ntBASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 AC016717.1-201ENST00000448918 286 ntBASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 RN7SL807P-201ENST00000470923 297 ntBASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 RPL36AP48-201ENST00000485521 314 ntBASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 RNA5SP395-201ENST00000516567 118 ntBASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 AP004607.2-201ENST00000533949 322 ntBASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 AC074101.1-201ENST00000637861 241 ntBASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC5.12□□□□□ -1.59
EFCAB3Q8N7B9 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 MIR133B-201ENST00000362210 119 ntBASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 RNA5SP183-201ENST00000362452 119 ntBASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 RNU6-1240P-201ENST00000365155 104 ntBASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 SNORA48.4-201ENST00000391089 134 ntBASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 RNA5SP225-201ENST00000410874 135 ntBASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 AC093162.1-201ENST00000419682 124 ntBASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 AP002884.2-201ENST00000471647 395 ntBASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 RPS29P21-201ENST00000496272 170 ntBASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 RNU6-1270P-201ENST00000517128 108 ntBASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 RN7SKP289-201ENST00000517244 295 ntBASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 AC074050.1-201ENST00000563247 211 ntBASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
EFCAB3Q8N7B9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 SNORA67-201ENST00000384423 137 ntBASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 SNORD77.3-201ENST00000391113 65 ntBASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 MIR1294-201ENST00000408503 142 ntBASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 AC016397.1-201ENST00000412463 242 ntBASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 CRYBB2P1-203ENST00000415709 538 ntBASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 MRPS17P9-201ENST00000511924 393 ntBASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 RNU6-830P-201ENST00000516353 107 ntBASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 RNY4P20-201ENST00000516678 93 ntBASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 HMGB1P40-201ENST00000525121 540 ntBASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 MIR3117-201ENST00000584034 78 ntBASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 BMS1P21-201ENST00000634565 365 ntBASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms