Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MIR4298-201ENST00000584380 73 ntBASIC3.54□□□□□ -1.84
SYNPOQ8N3V7 AC010928.2-201ENST00000588017 287 ntBASIC3.54□□□□□ -1.84
SYNPOQ8N3V7 AP000942.4-201ENST00000604811 241 ntBASIC3.54□□□□□ -1.84
SYNPOQ8N3V7 U4.6-201ENST00000621618 127 ntBASIC3.54□□□□□ -1.84
SYNPOQ8N3V7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SYNPOQ8N3V7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 AP000560.1-201ENST00000624150 1937 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 snoU2_19.1-201ENST00000362361 80 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 Y_RNA.358-201ENST00000365491 99 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 MRPL42P3-201ENST00000401492 326 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 U3.39-201ENST00000408569 239 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 AL353752.1-201ENST00000454946 260 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 RN7SL594P-201ENST00000470590 287 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 AL049873.1-201ENST00000480540 376 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 RNU6-567P-201ENST00000516746 107 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 AC109329.1-201ENST00000518744 317 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 AC104581.2-201ENST00000572227 430 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 AC006600.1-201ENST00000572529 153 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 Z98751.3-201ENST00000604447 521 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 AL162713.1-201ENST00000604480 262 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 AL034555.1-201ENST00000604816 211 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 AL159153.1-201ENST00000619688 317 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 AC090517.3-201ENST00000625170 141 ntBASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SYNPOQ8N3V7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.53□□□□□ -1.85
SYNPOQ8N3V7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 RNU6-486P-201ENST00000363116 107 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 RNU6-1210P-201ENST00000363775 107 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 RNU6-283P-201ENST00000364788 107 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 RNU1-115P-201ENST00000365329 160 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 RNU6-1032P-201ENST00000384100 107 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 RNU6-1160P-201ENST00000384546 104 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 SNORA48.8-201ENST00000391324 134 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 RNU4-47P-201ENST00000410876 114 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 AC114482.1-201ENST00000418010 247 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 AC012306.1-201ENST00000423267 114 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 RPS29P31-201ENST00000446147 164 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 HMGB1P35-201ENST00000503360 598 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 MIR5571-201ENST00000577998 113 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 MIR3199-1-201ENST00000582434 88 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 MIR3136-201ENST00000583498 78 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 U7.8-201ENST00000619968 63 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 AC005592.1-201ENST00000566527 1640 ntBASIC3.52□□□□□ -1.85
SYNPOQ8N3V7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 RNU5B-2P-201ENST00000363036 113 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 Y_RNA.106-201ENST00000363189 100 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 RNU4-42P-201ENST00000364738 142 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 Y_RNA.424-201ENST00000384063 103 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 MIR153-2-201ENST00000385225 87 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 MIR208B-201ENST00000401172 77 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 AL445305.1-201ENST00000432577 575 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 NDUFB1P1-201ENST00000435191 180 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 AP001486.1-201ENST00000463339 476 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 S100A11P2-201ENST00000467589 312 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 SCARNA11.3-201ENST00000517276 130 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 AC016256.1-201ENST00000547971 354 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 MIR4738-201ENST00000579134 87 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 AL078605.1-201ENST00000603529 500 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 AC137590.2-201ENST00000619709 240 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 AL606534.2-204ENST00000635008 178 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 AL450472.1-202ENST00000637286 180 ntBASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SYNPOQ8N3V7 AC091812.1-201ENST00000432235 1948 ntBASIC3.5□□□□□ -1.85
SYNPOQ8N3V7 ZNF826P-207ENST00000622273 1910 ntBASIC3.5□□□□□ -1.85
SYNPOQ8N3V7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SYNPOQ8N3V7 RNU6-874P-201ENST00000362390 105 ntBASIC3.5□□□□□ -1.85
SYNPOQ8N3V7 AC117470.1-201ENST00000381974 330 ntBASIC3.5□□□□□ -1.85
SYNPOQ8N3V7 RNU6-1093P-201ENST00000391194 107 ntBASIC3.5□□□□□ -1.85
SYNPOQ8N3V7 CYCSP48-201ENST00000417124 323 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms