Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 BTF3L4P2-201ENST00000392798 346 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 RNU2-23P-201ENST00000410545 195 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.53□□□□□ -2
BEST3Q8N1M1 AC097463.2-201ENST00000421074 142 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.53□□□□□ -2
BEST3Q8N1M1 RPL39P29-201ENST00000447779 157 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.53□□□□□ -2
BEST3Q8N1M1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.53□□□□□ -2
BEST3Q8N1M1 AC112771.1-201ENST00000463581 102 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 MTND4P17-201ENST00000470444 350 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 PTP4A1P4-201ENST00000512479 322 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 RNA5SP112-201ENST00000515937 99 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 RNU6-277P-201ENST00000516272 106 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 RNU6-1016P-201ENST00000516689 94 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.53□□□□□ -2
BEST3Q8N1M1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.53□□□□□ -2
BEST3Q8N1M1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.53□□□□□ -2
BEST3Q8N1M1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.53□□□□□ -2
BEST3Q8N1M1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.53□□□□□ -2
BEST3Q8N1M1 AL117336.2-201ENST00000602435 335 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 MIR8076-201ENST00000611401 83 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 AC104985.2-201ENST00000620598 500 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 AC112487.2-201ENST00000637950 304 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.53□□□□□ -2
BEST3Q8N1M1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.53□□□□□ -2
BEST3Q8N1M1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.53□□□□□ -2
BEST3Q8N1M1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
BEST3Q8N1M1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
BEST3Q8N1M1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.53□□□□□ -2.01
BEST3Q8N1M1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
BEST3Q8N1M1 RNU6-486P-201ENST00000363116 107 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 Y_RNA.384-201ENST00000383909 102 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 Y_RNA.387-201ENST00000383918 102 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 MIR521-1-201ENST00000384902 87 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.52□□□□□ -2.01
BEST3Q8N1M1 MTND3P9-201ENST00000429526 346 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 MICF-203ENST00000432679 129 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.52□□□□□ -2.01
BEST3Q8N1M1 SNORD5.1-201ENST00000458800 75 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 RPS29P27-201ENST00000463711 170 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 AC003982.1-202ENST00000469928 248 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 RPL30P12-201ENST00000474666 353 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 ACA59.1-201ENST00000515966 143 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.52□□□□□ -2.01
BEST3Q8N1M1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.52□□□□□ -2.01
BEST3Q8N1M1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.52□□□□□ -2.01
BEST3Q8N1M1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.52□□□□□ -2.01
BEST3Q8N1M1 AC078795.3-201ENST00000602913 472 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 AC016727.1-205ENST00000605437 569 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 AC138915.1-201ENST00000565427 1685 ntBASIC2.52□□□□□ -2.01
BEST3Q8N1M1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
BEST3Q8N1M1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
BEST3Q8N1M1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
BEST3Q8N1M1 Z75746.1-201ENST00000440243 2080 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST3Q8N1M1 MIR26A1-201ENST00000362205 77 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 SNORD32A-201ENST00000364805 84 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 U8.8-201ENST00000365399 135 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 RNU6-43P-201ENST00000384302 107 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 RNU6-306P-201ENST00000384617 107 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 MIR181A2-201ENST00000384863 110 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 AL133396.1-201ENST00000432048 687 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.51□□□□□ -2.01
BEST3Q8N1M1 RPS29P6-201ENST00000438196 145 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 AL031659.1-201ENST00000447075 539 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST3Q8N1M1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.51□□□□□ -2.01
BEST3Q8N1M1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST3Q8N1M1 RNU6-56P-201ENST00000516986 93 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.51□□□□□ -2.01
BEST3Q8N1M1 AL355375.2-201ENST00000574825 175 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.51□□□□□ -2.01
BEST3Q8N1M1 AC018462.2-201ENST00000605375 395 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 MIR3976-201ENST00000606807 139 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST3Q8N1M1 MIR7157-201ENST00000635801 60 ntBASIC2.51□□□□□ -2.01
BEST3Q8N1M1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
BEST3Q8N1M1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
BEST3Q8N1M1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
BEST3Q8N1M1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
BEST3Q8N1M1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
BEST3Q8N1M1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
BEST3Q8N1M1 OR56A5-201ENST00000340110 738 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 RNU4-73P-201ENST00000363164 141 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 RNU6-596P-201ENST00000365395 98 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 RNU1-57P-201ENST00000384491 166 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
BEST3Q8N1M1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.5□□□□□ -2.01
BEST3Q8N1M1 AL513477.1-202ENST00000417061 214 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 CYCSP48-201ENST00000417124 323 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 RPL23AP95-201ENST00000426806 265 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 AC078809.1-201ENST00000427601 140 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 USP9YP30-201ENST00000430729 455 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.5□□□□□ -2.01
BEST3Q8N1M1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.5□□□□□ -2.01
BEST3Q8N1M1 RN7SL297P-201ENST00000483161 293 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.5□□□□□ -2.01
BEST3Q8N1M1 Y_RNA.708-201ENST00000516950 96 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms