Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MIR1289-2-201ENST00000408360 111 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 U3.40-201ENST00000408706 208 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 RNU4-26P-201ENST00000410270 107 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AL117339.3-201ENST00000418733 162 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 ZNF885P-201ENST00000420174 1098 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AC003685.2-201ENST00000422795 395 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 RPS3AP44-201ENST00000425466 790 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 RPL30P4-201ENST00000429309 333 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 RPS15AP28-201ENST00000435088 386 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 RNU7-26P-201ENST00000458980 63 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 RPL23AP49-201ENST00000492925 468 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 RNU6-237P-201ENST00000515985 71 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 RNU6-718P-201ENST00000516166 105 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 MIR1273D-201ENST00000577266 86 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 MIR4769-201ENST00000584126 77 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 VN1R107P-201ENST00000601784 209 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AC069294.1-201ENST00000608397 350 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 RMST_3.1-201ENST00000611651 109 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AC092794.1-201ENST00000612734 582 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 HMGB1P24-202ENST00000615653 685 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 MIR6873-201ENST00000622788 63 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC71Q8IV32 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.1□□□□□ -2.07
CCDC71Q8IV32 RNU6-527P-201ENST00000363425 104 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 RNU6-105P-201ENST00000363909 104 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 Y_RNA.295-201ENST00000364918 102 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 RNU4-52P-201ENST00000384209 138 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC71Q8IV32 RPS29P13-201ENST00000402041 169 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 MIR1277-201ENST00000408536 78 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 RNA5SP118-201ENST00000410385 109 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 RNA5SP338-201ENST00000410495 85 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 AC138623.1-201ENST00000418060 216 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC71Q8IV32 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC71Q8IV32 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC71Q8IV32 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC71Q8IV32 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC71Q8IV32 HMGN2P26-201ENST00000463169 339 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC71Q8IV32 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.09□□□□□ -2.07
CCDC71Q8IV32 AC010186.2-204ENST00000537668 439 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC71Q8IV32 AC105245.1-201ENST00000581934 244 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 MIR5692C1-201ENST00000585309 91 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 AC146944.4-201ENST00000602697 718 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 AC012640.5-201ENST00000623897 319 ntBASIC2.09□□□□□ -2.07
CCDC71Q8IV32 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
CCDC71Q8IV32 AC002543.1-201ENST00000299783 1954 ntBASIC2.09□□□□□ -2.08
CCDC71Q8IV32 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC71Q8IV32 MTND5P6-201ENST00000422338 1798 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC71Q8IV32 SNORA51.11-201ENST00000384442 131 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 RNU1-57P-201ENST00000384491 166 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 RNU6-332P-201ENST00000391193 108 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AL355497.1-201ENST00000406262 551 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 Y_RNA.615-201ENST00000410769 117 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 HMGB3P2-201ENST00000411913 584 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC71Q8IV32 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AC096638.1-201ENST00000444678 216 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC71Q8IV32 FGF7P6-202ENST00000451282 293 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 Y_RNA.638-201ENST00000459374 113 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AC092989.1-201ENST00000481235 277 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AC083904.1-201ENST00000487828 231 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AC079804.2-201ENST00000490376 200 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 SNORA19.2-201ENST00000516013 114 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AC105137.2-201ENST00000569073 466 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC71Q8IV32 MIR5002-201ENST00000584713 97 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 BNIP3P16-201ENST00000589779 534 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 BNIP3P25-201ENST00000596023 559 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AC104458.1-201ENST00000608243 463 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AL121757.2-201ENST00000611223 313 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AC007014.2-201ENST00000615581 479 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 U6atac.1-201ENST00000616025 117 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 AL449363.1-201ENST00000617815 186 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 MIR6766-201ENST00000622641 72 ntBASIC2.08□□□□□ -2.08
CCDC71Q8IV32 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC71Q8IV32 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC71Q8IV32 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC71Q8IV32 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms