Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 RNU1-62P-201ENST00000362599 164 ntBASIC4.6□□□□□ -1.67
RNF135Q8IUD6 RNU6-727P-201ENST00000363592 107 ntBASIC4.6□□□□□ -1.67
RNF135Q8IUD6 AL591034.1-201ENST00000407447 340 ntBASIC4.6□□□□□ -1.67
RNF135Q8IUD6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 AC009963.1-201ENST00000417265 157 ntBASIC4.6□□□□□ -1.67
RNF135Q8IUD6 Z74021.1-201ENST00000423610 407 ntBASIC4.6□□□□□ -1.67
RNF135Q8IUD6 AL591419.1-201ENST00000427423 339 ntBASIC4.6□□□□□ -1.67
RNF135Q8IUD6 AL445584.1-201ENST00000431451 330 ntBASIC4.6□□□□□ -1.67
RNF135Q8IUD6 AL161651.1-201ENST00000440882 223 ntBASIC4.6□□□□□ -1.67
RNF135Q8IUD6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 AC016925.1-201ENST00000458303 298 ntBASIC4.6□□□□□ -1.67
RNF135Q8IUD6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 DEFB131C-201ENST00000528817 165 ntBASIC4.6□□□□□ -1.67
RNF135Q8IUD6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 AC090616.3-201ENST00000582184 217 ntBASIC4.6□□□□□ -1.67
RNF135Q8IUD6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 AL133243.3-201ENST00000617415 3004 ntBASIC4.6□□□□□ -1.67
RNF135Q8IUD6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF135Q8IUD6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF135Q8IUD6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF135Q8IUD6 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF135Q8IUD6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF135Q8IUD6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RNF135Q8IUD6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF135Q8IUD6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF135Q8IUD6 RNA5SP130-201ENST00000364431 114 ntBASIC4.59□□□□□ -1.67
RNF135Q8IUD6 RNU6-275P-201ENST00000364910 107 ntBASIC4.59□□□□□ -1.67
RNF135Q8IUD6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF135Q8IUD6 MIR513C-201ENST00000401352 84 ntBASIC4.59□□□□□ -1.67
RNF135Q8IUD6 RPL21P65-201ENST00000406094 466 ntBASIC4.59□□□□□ -1.67
RNF135Q8IUD6 RPL23AP52-201ENST00000439311 478 ntBASIC4.59□□□□□ -1.67
RNF135Q8IUD6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF135Q8IUD6 snoU13.28-201ENST00000459235 104 ntBASIC4.59□□□□□ -1.67
RNF135Q8IUD6 AC006517.1-201ENST00000480485 328 ntBASIC4.59□□□□□ -1.67
RNF135Q8IUD6 AIG1P1-201ENST00000503376 148 ntBASIC4.59□□□□□ -1.67
RNF135Q8IUD6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF135Q8IUD6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.59□□□□□ -1.67
RNF135Q8IUD6 MIR3609-201ENST00000582661 80 ntBASIC4.59□□□□□ -1.67
RNF135Q8IUD6 MIR4298-201ENST00000584380 73 ntBASIC4.59□□□□□ -1.67
RNF135Q8IUD6 AL162713.1-201ENST00000604480 262 ntBASIC4.59□□□□□ -1.67
RNF135Q8IUD6 AC005520.5-201ENST00000613926 164 ntBASIC4.59□□□□□ -1.67
RNF135Q8IUD6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RNF135Q8IUD6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RNF135Q8IUD6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RNF135Q8IUD6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.59□□□□□ -1.68
RNF135Q8IUD6 AC087190.4-201ENST00000574616 8334 ntBASIC4.59□□□□□ -1.68
RNF135Q8IUD6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF135Q8IUD6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF135Q8IUD6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF135Q8IUD6 AC004944.1-201ENST00000517807 3059 ntBASIC4.58□□□□□ -1.68
RNF135Q8IUD6 SNORA18.3-201ENST00000384122 132 ntBASIC4.58□□□□□ -1.68
RNF135Q8IUD6 RNA5SP475-201ENST00000410568 110 ntBASIC4.58□□□□□ -1.68
RNF135Q8IUD6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF135Q8IUD6 CYCSP48-201ENST00000417124 323 ntBASIC4.58□□□□□ -1.68
RNF135Q8IUD6 RPL23AP82-202ENST00000427528 469 ntBASIC4.58□□□□□ -1.68
RNF135Q8IUD6 RPL30P14-201ENST00000482744 348 ntBASIC4.58□□□□□ -1.68
RNF135Q8IUD6 HMGN2P15-201ENST00000585707 270 ntBASIC4.58□□□□□ -1.68
RNF135Q8IUD6 SNRPGP20-201ENST00000604477 205 ntBASIC4.58□□□□□ -1.68
RNF135Q8IUD6 AL670379.2-201ENST00000604983 252 ntBASIC4.58□□□□□ -1.68
RNF135Q8IUD6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
RNF135Q8IUD6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF135Q8IUD6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF135Q8IUD6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF135Q8IUD6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF135Q8IUD6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF135Q8IUD6 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF135Q8IUD6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF135Q8IUD6 SNORA1.3-201ENST00000384676 136 ntBASIC4.57□□□□□ -1.68
RNF135Q8IUD6 RNY4P18-201ENST00000391107 89 ntBASIC4.57□□□□□ -1.68
RNF135Q8IUD6 AC096649.2-201ENST00000416186 393 ntBASIC4.57□□□□□ -1.68
RNF135Q8IUD6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.57□□□□□ -1.68
RNF135Q8IUD6 HMGN2P16-201ENST00000456802 261 ntBASIC4.57□□□□□ -1.68
RNF135Q8IUD6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF135Q8IUD6 AC103975.1-201ENST00000482506 483 ntBASIC4.57□□□□□ -1.68
RNF135Q8IUD6 MIR3923-201ENST00000579521 83 ntBASIC4.57□□□□□ -1.68
RNF135Q8IUD6 AC007179.3-201ENST00000604976 235 ntBASIC4.57□□□□□ -1.68
RNF135Q8IUD6 AC002076.2-201ENST00000617362 122 ntBASIC4.57□□□□□ -1.68
RNF135Q8IUD6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.57□□□□□ -1.68
RNF135Q8IUD6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF135Q8IUD6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 AL500522.2-201ENST00000448562 343 ntBASIC4.56□□□□□ -1.68
RNF135Q8IUD6 AC074290.1-201ENST00000448883 135 ntBASIC4.56□□□□□ -1.68
RNF135Q8IUD6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.56□□□□□ -1.68
RNF135Q8IUD6 RN7SL691P-201ENST00000494487 301 ntBASIC4.56□□□□□ -1.68
RNF135Q8IUD6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms