Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 RNU7-175P-201ENST00000515915 61 ntBASIC2.7□□□□□ -1.98
TMEM88Q6PEY1 SNORD116.3-201ENST00000517176 78 ntBASIC2.7□□□□□ -1.98
TMEM88Q6PEY1 RN7SKP295-201ENST00000517264 153 ntBASIC2.7□□□□□ -1.98
TMEM88Q6PEY1 AC109329.1-201ENST00000518744 317 ntBASIC2.7□□□□□ -1.98
TMEM88Q6PEY1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.7□□□□□ -1.98
TMEM88Q6PEY1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.7□□□□□ -1.98
TMEM88Q6PEY1 AC021231.3-201ENST00000558497 370 ntBASIC2.7□□□□□ -1.98
TMEM88Q6PEY1 MIR5571-201ENST00000577998 113 ntBASIC2.7□□□□□ -1.98
TMEM88Q6PEY1 AL034555.1-201ENST00000604816 211 ntBASIC2.7□□□□□ -1.98
TMEM88Q6PEY1 RPL23AP88-201ENST00000605759 454 ntBASIC2.7□□□□□ -1.98
TMEM88Q6PEY1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.7□□□□□ -1.98
TMEM88Q6PEY1 ZNF72P-201ENST00000425869 1908 ntBASIC2.7□□□□□ -1.98
TMEM88Q6PEY1 AC080128.1-201ENST00000474389 1917 ntBASIC2.7□□□□□ -1.98
TMEM88Q6PEY1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 RNU6-874P-201ENST00000362390 105 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 RNU5B-2P-201ENST00000363036 113 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 Y_RNA.112-201ENST00000363250 102 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 RNU6-1210P-201ENST00000363775 107 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 RNU6-1180P-201ENST00000364935 107 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 Y_RNA.577-201ENST00000384794 101 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 MIR23B-201ENST00000384832 97 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 MIR627-201ENST00000384979 97 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 PTMAP2-201ENST00000397627 327 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 RNA5SP492-201ENST00000411330 114 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 CYCSP48-201ENST00000417124 323 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 AC007098.1-201ENST00000420122 367 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 AL139247.1-201ENST00000422768 325 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 MTCYBP10-201ENST00000424905 650 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 AL445305.1-201ENST00000432577 575 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 GSTA11P-201ENST00000452866 669 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 snoU13.14-201ENST00000459372 104 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 RPL23AP70-201ENST00000483361 460 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 RPL21P129-201ENST00000491732 478 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 RNA5SP76-201ENST00000516277 87 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 RNA5SP164-201ENST00000516533 110 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 RNU6-579P-201ENST00000516879 102 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 Y_RNA.711-201ENST00000516993 102 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 COX6CP5-201ENST00000527162 228 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 AC007458.1-201ENST00000542812 373 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 RPL30P11-203ENST00000598995 310 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 AC040896.1-201ENST00000613819 479 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 AC090517.3-201ENST00000625170 141 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 SCARNA4-201ENST00000629045 128 ntBASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.69□□□□□ -1.98
TMEM88Q6PEY1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 AP000560.1-201ENST00000624150 1937 ntBASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 MIR200C-201ENST00000384980 68 ntBASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 MIR549A-201ENST00000385268 96 ntBASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 AC012306.1-201ENST00000423267 114 ntBASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 AC018865.2-201ENST00000423631 129 ntBASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 RPS12P18-201ENST00000442381 270 ntBASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 OR2AQ1P-201ENST00000451972 200 ntBASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 AC007991.1-201ENST00000522680 631 ntBASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 AC092447.9-201ENST00000603395 144 ntBASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 AC006133.1-201ENST00000617106 264 ntBASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.68□□□□□ -1.98
TMEM88Q6PEY1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 MTND4P1-201ENST00000457501 1466 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 Y_RNA.80-201ENST00000362996 102 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 Y_RNA.252-201ENST00000364556 101 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 RNU4-56P-201ENST00000364700 142 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 Y_RNA.326-201ENST00000365176 113 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 Y_RNA.485-201ENST00000384395 102 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 RNY1P14-201ENST00000384426 108 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 MIR625-201ENST00000385047 85 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 SNORA26.3-201ENST00000391119 136 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 AL138885.1-201ENST00000405921 675 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 MCFD2P1-201ENST00000417812 300 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 AC099799.1-201ENST00000439809 192 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 RPL21P2-201ENST00000440049 481 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 RPL39P40-201ENST00000445481 146 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 AL133547.1-201ENST00000448546 220 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 AC115115.1-201ENST00000449927 248 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 AC090515.1-201ENST00000465295 476 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 SCARNA14-201ENST00000516903 136 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 Y_RNA.706-201ENST00000516933 99 ntBASIC2.67□□□□□ -1.98
TMEM88Q6PEY1 SCARNA3-201ENST00000517097 143 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms