Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC092628.2-201ENST00000622492 339 ntBASIC4.12□□□□□ -1.75
RNF43Q68DV7 AC048347.1-201ENST00000624621 427 ntBASIC4.12□□□□□ -1.75
RNF43Q68DV7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF43Q68DV7 MIR4679-1-201ENST00000637619 75 ntBASIC4.12□□□□□ -1.75
RNF43Q68DV7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF43Q68DV7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF43Q68DV7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF43Q68DV7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF43Q68DV7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RNF43Q68DV7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF43Q68DV7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF43Q68DV7 AC073346.2-201ENST00000624724 2058 ntBASIC4.12□□□□□ -1.75
RNF43Q68DV7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF43Q68DV7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF43Q68DV7 Z73965.1-201ENST00000623412 2297 ntBASIC4.11□□□□□ -1.75
RNF43Q68DV7 IPO8P1-201ENST00000455509 3109 ntBASIC4.11□□□□□ -1.75
RNF43Q68DV7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.11□□□□□ -1.75
RNF43Q68DV7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RNF43Q68DV7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF43Q68DV7 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.11□□□□□ -1.75
RNF43Q68DV7 RNU6-275P-201ENST00000364910 107 ntBASIC4.11□□□□□ -1.75
RNF43Q68DV7 MIR634-201ENST00000385208 97 ntBASIC4.11□□□□□ -1.75
RNF43Q68DV7 Z98941.1-201ENST00000407764 100 ntBASIC4.11□□□□□ -1.75
RNF43Q68DV7 RN7SKP177-201ENST00000410567 355 ntBASIC4.11□□□□□ -1.75
RNF43Q68DV7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF43Q68DV7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF43Q68DV7 RPS20P22-201ENST00000473700 357 ntBASIC4.11□□□□□ -1.75
RNF43Q68DV7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF43Q68DV7 Y_RNA.797-201ENST00000515977 94 ntBASIC4.11□□□□□ -1.75
RNF43Q68DV7 AC026403.1-201ENST00000518938 295 ntBASIC4.11□□□□□ -1.75
RNF43Q68DV7 GNRHR2P1-201ENST00000555315 631 ntBASIC4.11□□□□□ -1.75
RNF43Q68DV7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF43Q68DV7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.11□□□□□ -1.75
RNF43Q68DV7 AC024614.2-201ENST00000577584 372 ntBASIC4.11□□□□□ -1.75
RNF43Q68DV7 MIR4298-201ENST00000584380 73 ntBASIC4.11□□□□□ -1.75
RNF43Q68DV7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF43Q68DV7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
RNF43Q68DV7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF43Q68DV7 AC008568.2-201ENST00000623862 2313 ntBASIC4.1□□□□□ -1.75
RNF43Q68DV7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RNF43Q68DV7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
RNF43Q68DV7 RNU6-1255P-201ENST00000363434 112 ntBASIC4.1□□□□□ -1.75
RNF43Q68DV7 MIR539-201ENST00000365690 78 ntBASIC4.1□□□□□ -1.75
RNF43Q68DV7 Y_RNA.542-201ENST00000384641 111 ntBASIC4.1□□□□□ -1.75
RNF43Q68DV7 MIR513C-201ENST00000401352 84 ntBASIC4.1□□□□□ -1.75
RNF43Q68DV7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF43Q68DV7 AC007919.1-201ENST00000429380 217 ntBASIC4.1□□□□□ -1.75
RNF43Q68DV7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF43Q68DV7 RNU6-58P-201ENST00000517143 103 ntBASIC4.1□□□□□ -1.75
RNF43Q68DV7 RNA5SP170-201ENST00000517150 101 ntBASIC4.1□□□□□ -1.75
RNF43Q68DV7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.1□□□□□ -1.75
RNF43Q68DV7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF43Q68DV7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF43Q68DV7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF43Q68DV7 MIR4458-201ENST00000578872 75 ntBASIC4.1□□□□□ -1.75
RNF43Q68DV7 SCARNA4-202ENST00000625402 129 ntBASIC4.1□□□□□ -1.75
RNF43Q68DV7 AL034408.1-202ENST00000636088 415 ntBASIC4.1□□□□□ -1.75
RNF43Q68DV7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RNF43Q68DV7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF43Q68DV7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF43Q68DV7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNF43Q68DV7 AC110491.1-201ENST00000562191 2010 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF43Q68DV7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.09□□□□□ -1.75
RNF43Q68DV7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF43Q68DV7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.09□□□□□ -1.75
RNF43Q68DV7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF43Q68DV7 RNU6-834P-201ENST00000362367 110 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 RNU5B-2P-201ENST00000363036 113 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 RNA5SP399-201ENST00000364003 117 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 SNORA72.2-201ENST00000365028 127 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNF43Q68DV7 RN7SKP156-201ENST00000410308 342 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 AC243964.1-201ENST00000441814 261 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 AC010095.1-201ENST00000443543 144 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 SNORA59A-201ENST00000459326 152 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 SNORA72.7-201ENST00000516349 94 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 SCARNA15.2-201ENST00000516409 127 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 RNU6-1256P-201ENST00000516539 103 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 SNORA43.2-201ENST00000516652 128 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.09□□□□□ -1.75
RNF43Q68DV7 MIR3658-201ENST00000636291 56 ntBASIC4.09□□□□□ -1.75
RNF43Q68DV7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF43Q68DV7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNF43Q68DV7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RNF43Q68DV7 MAPK10-373ENST00000641983 6772 ntBASIC4.09□□□□□ -1.76
RNF43Q68DV7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RNF43Q68DV7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RNF43Q68DV7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RNF43Q68DV7 Y_RNA.101-201ENST00000363154 102 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.08□□□□□ -1.76
RNF43Q68DV7 RNU6-1056P-201ENST00000383996 107 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 MIR153-1-201ENST00000384914 90 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RNF43Q68DV7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.08□□□□□ -1.76
RNF43Q68DV7 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 AC138623.1-201ENST00000418060 216 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 EBAG9P1-201ENST00000418955 543 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 PTGES3P4-201ENST00000426243 356 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms