Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 Y_RNA.54-201ENST00000362766 105 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 Y_RNA.180-201ENST00000363867 113 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 RNU6-879P-201ENST00000364328 108 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 RNU6-1141P-201ENST00000364520 107 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 Y_RNA.510-201ENST00000384511 114 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 RNU6-541P-201ENST00000384709 110 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 RPS4XP3-201ENST00000398541 413 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 MIR1289-1-201ENST00000408836 144 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 RN7SKP61-201ENST00000410642 295 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 AC096638.1-201ENST00000444678 216 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 PRELID3BP1-201ENST00000457142 540 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 S100A11P2-201ENST00000467589 312 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 AP000870.1-201ENST00000472927 406 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 RPS4XP13-201ENST00000483219 789 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 AC016632.1-201ENST00000503994 196 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 MIR4513-201ENST00000581077 86 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 MIR4276-201ENST00000584832 70 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 AC020895.1-201ENST00000595362 272 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 AL451007.1-201ENST00000595491 289 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 AC073657.2-201ENST00000605661 303 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 AL356274.2-201ENST00000624379 3752 ntBASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 MAPK10-373ENST00000641983 6772 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 Y_RNA.65-201ENST00000362846 100 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 Y_RNA.200-201ENST00000364018 102 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 Y_RNA.297-201ENST00000364950 91 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 RNU6-318P-201ENST00000384283 103 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 RNU6-937P-201ENST00000384325 106 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 SNORA53-201ENST00000391141 249 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 AL357075.1-201ENST00000404107 726 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 Y_RNA.602-201ENST00000410535 92 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 RNU5A-5P-201ENST00000411054 116 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 AL139156.1-201ENST00000412785 841 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 AC078809.1-201ENST00000427601 140 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 MRPL42P6-201ENST00000486397 371 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 SEPT14P8-201ENST00000508026 178 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 RN7SKP49-201ENST00000516675 260 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 RNU6-579P-201ENST00000516879 102 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 CKS1BP7-201ENST00000522230 235 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 AK6P2-201ENST00000549020 471 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 SNORD113-5-201ENST00000607261 78 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 AL162274.2-201ENST00000614406 332 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 AC127459.3-201ENST00000624328 466 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 AC006386.2-201ENST00000624491 75 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 AC012005.1-201ENST00000624575 75 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 MIR3529-201ENST00000637713 78 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 AC073073.2-201ENST00000609827 2578 ntBASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.36□□□□□ -1.71
USPL1Q5W0Q7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 Z83843.1-201ENST00000604070 3685 ntBASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 Y_RNA.16-201ENST00000362421 102 ntBASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 SNORD56.1-201ENST00000362913 68 ntBASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 SNORD115-8-201ENST00000363856 82 ntBASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 Y_RNA.277-201ENST00000364754 102 ntBASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 SNORD115-38-201ENST00000365037 82 ntBASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 RN7SKP111-201ENST00000410349 271 ntBASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 AL390729.2-201ENST00000416137 156 ntBASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 AC006028.1-201ENST00000438379 402 ntBASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 RPS27AP10-201ENST00000496103 208 ntBASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 RNA5SP341-201ENST00000516261 117 ntBASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 LARP7P3-201ENST00000579888 337 ntBASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 AC004792.1-201ENST00000614523 137 ntBASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USPL1Q5W0Q7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 CUL1P1-201ENST00000509510 2425 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 AC092268.1-201ENST00000342691 405 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 RNU6-1159P-201ENST00000362933 107 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 RNU5F-3P-201ENST00000363767 117 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 Y_RNA.319-201ENST00000365138 92 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 RNU6-326P-201ENST00000365480 107 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 HSPE1P26-201ENST00000405341 275 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 MIR548M-201ENST00000408260 86 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 AC005002.2-201ENST00000438228 269 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 FCF1P8-201ENST00000510322 597 ntBASIC4.34□□□□□ -1.71
USPL1Q5W0Q7 AC027288.2-201ENST00000553028 243 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms