Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VARS2Q5ST30 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VARS2Q5ST30 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.1□□□□□ -1.59
VARS2Q5ST30 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC5.1□□□□□ -1.59
VARS2Q5ST30 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VARS2Q5ST30 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
VARS2Q5ST30 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
VARS2Q5ST30 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VARS2Q5ST30 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.09□□□□□ -1.59
VARS2Q5ST30 Y_RNA.190-201ENST00000363964 101 ntBASIC5.09□□□□□ -1.59
VARS2Q5ST30 SNORA70F-201ENST00000384142 135 ntBASIC5.09□□□□□ -1.59
VARS2Q5ST30 RPL36AP10-201ENST00000421785 322 ntBASIC5.09□□□□□ -1.59
VARS2Q5ST30 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.09□□□□□ -1.59
VARS2Q5ST30 RNU7-149P-201ENST00000516739 59 ntBASIC5.09□□□□□ -1.59
VARS2Q5ST30 AC109329.2-201ENST00000519658 482 ntBASIC5.09□□□□□ -1.59
VARS2Q5ST30 MIR2681-201ENST00000581814 105 ntBASIC5.09□□□□□ -1.59
VARS2Q5ST30 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.09□□□□□ -1.59
VARS2Q5ST30 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.09□□□□□ -1.59
VARS2Q5ST30 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VARS2Q5ST30 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VARS2Q5ST30 AL022322.2-201ENST00000624072 20397 ntBASIC5.09□□□□□ -1.59
VARS2Q5ST30 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.09□□□□□ -1.6
VARS2Q5ST30 AC139713.2-214ENST00000642059 1811 ntBASIC5.09□□□□□ -1.6
VARS2Q5ST30 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.09□□□□□ -1.6
VARS2Q5ST30 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VARS2Q5ST30 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
VARS2Q5ST30 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.08□□□□□ -1.6
VARS2Q5ST30 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VARS2Q5ST30 SNORA33-201ENST00000363664 130 ntBASIC5.08□□□□□ -1.6
VARS2Q5ST30 RNU6-1229P-201ENST00000364295 107 ntBASIC5.08□□□□□ -1.6
VARS2Q5ST30 RNY1P6-201ENST00000384193 109 ntBASIC5.08□□□□□ -1.6
VARS2Q5ST30 MIR562-201ENST00000384894 95 ntBASIC5.08□□□□□ -1.6
VARS2Q5ST30 RNU1-82P-201ENST00000390851 165 ntBASIC5.08□□□□□ -1.6
VARS2Q5ST30 AL590383.1-201ENST00000428602 75 ntBASIC5.08□□□□□ -1.6
VARS2Q5ST30 CKS1BP5-201ENST00000434172 273 ntBASIC5.08□□□□□ -1.6
VARS2Q5ST30 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.08□□□□□ -1.6
VARS2Q5ST30 AC022790.1-201ENST00000522872 204 ntBASIC5.08□□□□□ -1.6
VARS2Q5ST30 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC5.08□□□□□ -1.6
VARS2Q5ST30 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC5.08□□□□□ -1.6
VARS2Q5ST30 AC093249.4-201ENST00000564755 259 ntBASIC5.08□□□□□ -1.6
VARS2Q5ST30 MTND6P33-201ENST00000571794 183 ntBASIC5.08□□□□□ -1.6
VARS2Q5ST30 AL356218.2-201ENST00000605264 187 ntBASIC5.08□□□□□ -1.6
VARS2Q5ST30 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.08□□□□□ -1.6
VARS2Q5ST30 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
VARS2Q5ST30 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VARS2Q5ST30 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.08□□□□□ -1.6
VARS2Q5ST30 AC017071.1-201ENST00000564407 2204 ntBASIC5.08□□□□□ -1.6
VARS2Q5ST30 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VARS2Q5ST30 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
VARS2Q5ST30 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
VARS2Q5ST30 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.07□□□□□ -1.6
VARS2Q5ST30 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VARS2Q5ST30 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VARS2Q5ST30 AL356292.1-201ENST00000283110 373 ntBASIC5.07□□□□□ -1.6
VARS2Q5ST30 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VARS2Q5ST30 RNA5SP515-201ENST00000364570 118 ntBASIC5.07□□□□□ -1.6
VARS2Q5ST30 RNU6-140P-201ENST00000384566 108 ntBASIC5.07□□□□□ -1.6
VARS2Q5ST30 OR9P1P-201ENST00000496431 281 ntBASIC5.07□□□□□ -1.6
VARS2Q5ST30 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.07□□□□□ -1.6
VARS2Q5ST30 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.07□□□□□ -1.6
VARS2Q5ST30 AL929325.1-201ENST00000603096 117 ntBASIC5.07□□□□□ -1.6
VARS2Q5ST30 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.07□□□□□ -1.6
VARS2Q5ST30 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VARS2Q5ST30 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
VARS2Q5ST30 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.07□□□□□ -1.6
VARS2Q5ST30 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VARS2Q5ST30 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
VARS2Q5ST30 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VARS2Q5ST30 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VARS2Q5ST30 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC5.06□□□□□ -1.6
VARS2Q5ST30 AC002543.1-201ENST00000299783 1954 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 PHKBP1-201ENST00000450951 1951 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
VARS2Q5ST30 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VARS2Q5ST30 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VARS2Q5ST30 SNORA27.1-201ENST00000362604 124 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 SNORD113.2-201ENST00000364166 89 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 SNORA18.2-201ENST00000383865 132 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 MRPL35P3-201ENST00000421557 364 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 RNU2-11P-201ENST00000459191 187 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 RPL27AP5-201ENST00000469428 449 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.06□□□□□ -1.6
VARS2Q5ST30 AC114801.3-201ENST00000510231 177 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 RNA5SP464-201ENST00000516251 108 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 RNU6-1006P-201ENST00000516998 103 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.06□□□□□ -1.6
VARS2Q5ST30 EIF4A1P12-201ENST00000551910 141 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC5.06□□□□□ -1.6
VARS2Q5ST30 MIR4716-201ENST00000579628 84 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 AC233702.9-201ENST00000581528 203 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 MIR4512-201ENST00000583257 77 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 AC091152.3-201ENST00000604227 325 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 AL034555.1-201ENST00000604816 211 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VARS2Q5ST30 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.06□□□□□ -1.6
VARS2Q5ST30 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
VARS2Q5ST30 FAM35CP-201ENST00000554755 2470 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
VARS2Q5ST30 AL672167.1-204ENST00000641875 3017 ntBASIC5.06□□□□□ -1.6
VARS2Q5ST30 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms