Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AL606489.2-201ENST00000433886 234 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 AC245102.2-201ENST00000448956 180 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 MTCO2P18-201ENST00000457151 658 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.75□□□□□ -2.13
RAB40BQ12829 RNA5SP233-201ENST00000459153 113 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.75□□□□□ -2.13
RAB40BQ12829 MTND3P5-201ENST00000512798 333 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.75□□□□□ -2.13
RAB40BQ12829 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.75□□□□□ -2.13
RAB40BQ12829 MTND1P15-201ENST00000579262 949 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 RNU6-85P-201ENST00000605989 107 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RAB40BQ12829 KPNA2P1-201ENST00000458289 1591 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 RNA5SP276-201ENST00000362580 94 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 SNORD14D-201ENST00000384390 87 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 MIR29C-201ENST00000385231 88 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 RNA5SP219-201ENST00000390940 113 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 SNORA46.1-201ENST00000391069 153 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.74□□□□□ -2.13
RAB40BQ12829 AL121601.2-201ENST00000438019 707 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 DNAJC19P4-201ENST00000440115 345 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.74□□□□□ -2.13
RAB40BQ12829 AC022447.4-201ENST00000504053 364 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 CCDC34P1-201ENST00000507441 517 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 AC009646.1-201ENST00000510455 318 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.74□□□□□ -2.13
RAB40BQ12829 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.74□□□□□ -2.13
RAB40BQ12829 AC091544.4-201ENST00000555268 342 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.74□□□□□ -2.13
RAB40BQ12829 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.74□□□□□ -2.13
RAB40BQ12829 MIR1273D-201ENST00000577266 86 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.74□□□□□ -2.13
RAB40BQ12829 AC018889.1-201ENST00000605372 397 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 HULC.1-201ENST00000612720 240 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 MIR6873-201ENST00000622788 63 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 AC139792.3-201ENST00000623525 224 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 ZNF702P-202ENST00000434269 1966 ntBASIC1.74□□□□□ -2.13
RAB40BQ12829 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RAB40BQ12829 ZNF658B-202ENST00000615961 3375 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RAB40BQ12829 SNORA11.2-201ENST00000408318 127 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AL663109.1-201ENST00000411498 844 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 SRIP3-201ENST00000413200 219 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 Z98742.3-201ENST00000418637 326 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AL590135.1-201ENST00000422215 156 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 DPH3P2-201ENST00000422618 250 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AC096920.1-201ENST00000423991 241 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AC019205.3-201ENST00000424573 156 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 SNAP23P1-201ENST00000433229 246 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AC244670.1-201ENST00000436879 112 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.73□□□□□ -2.13
RAB40BQ12829 AC016700.2-201ENST00000446011 156 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AC087884.1-201ENST00000469738 328 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.73□□□□□ -2.13
RAB40BQ12829 AC015911.1-201ENST00000495111 156 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AC145146.1-201ENST00000496370 254 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.73□□□□□ -2.13
RAB40BQ12829 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.73□□□□□ -2.13
RAB40BQ12829 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.73□□□□□ -2.13
RAB40BQ12829 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.73□□□□□ -2.13
RAB40BQ12829 PTP4A1P4-201ENST00000512479 322 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AC008549.1-201ENST00000512900 643 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 SNORA40.12-201ENST00000516329 111 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.73□□□□□ -2.13
RAB40BQ12829 HSPE1P4-201ENST00000550617 308 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AC090115.3-201ENST00000553218 849 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 TRAV32-201ENST00000553993 340 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.73□□□□□ -2.13
RAB40BQ12829 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.73□□□□□ -2.13
RAB40BQ12829 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.73□□□□□ -2.13
RAB40BQ12829 AP005136.1-201ENST00000579765 429 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 MIR3136-201ENST00000583498 78 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AC087683.1-201ENST00000591187 441 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
RAB40BQ12829 SDR42E1P4-201ENST00000620894 481 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 MIR1248-201ENST00000629190 106 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AP000560.1-201ENST00000624150 1937 ntBASIC1.73□□□□□ -2.13
RAB40BQ12829 AL359851.1-201ENST00000569460 4997 ntBASIC1.72□□□□□ -2.13
RAB40BQ12829 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
RAB40BQ12829 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.72□□□□□ -2.13
RAB40BQ12829 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RAB40BQ12829 RNU4-15P-201ENST00000362613 141 ntBASIC1.72□□□□□ -2.13
RAB40BQ12829 AL512604.1-201ENST00000404812 257 ntBASIC1.72□□□□□ -2.13
RAB40BQ12829 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.72□□□□□ -2.13
RAB40BQ12829 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.72□□□□□ -2.13
RAB40BQ12829 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.72□□□□□ -2.13
RAB40BQ12829 AL353705.4-201ENST00000449661 238 ntBASIC1.72□□□□□ -2.13
RAB40BQ12829 PMCHL2-203ENST00000457791 237 ntBASIC1.72□□□□□ -2.13
RAB40BQ12829 TRBV12-1-201ENST00000479785 344 ntBASIC1.72□□□□□ -2.13
RAB40BQ12829 RPL21P99-201ENST00000480369 423 ntBASIC1.72□□□□□ -2.13
RAB40BQ12829 RNU6-405P-201ENST00000516637 110 ntBASIC1.72□□□□□ -2.13
RAB40BQ12829 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.72□□□□□ -2.13
RAB40BQ12829 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.72□□□□□ -2.13
RAB40BQ12829 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.72□□□□□ -2.13
RAB40BQ12829 AP003034.1-201ENST00000534621 422 ntBASIC1.72□□□□□ -2.13
RAB40BQ12829 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.72□□□□□ -2.13
RAB40BQ12829 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.72□□□□□ -2.13
RAB40BQ12829 PIGPP4-201ENST00000584447 307 ntBASIC1.72□□□□□ -2.13
RAB40BQ12829 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.72□□□□□ -2.13
RAB40BQ12829 Y_RNA.783-201ENST00000613546 102 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms