Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.76□□□□□ -1.97
LTBQ06643 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.76□□□□□ -1.97
LTBQ06643 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.76□□□□□ -1.97
LTBQ06643 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LTBQ06643 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.75□□□□□ -1.97
LTBQ06643 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.75□□□□□ -1.97
LTBQ06643 MAPK10-322ENST00000641485 4530 ntBASIC2.75□□□□□ -1.97
LTBQ06643 Y_RNA.106-201ENST00000363189 100 ntBASIC2.75□□□□□ -1.97
LTBQ06643 RNU4-42P-201ENST00000364738 142 ntBASIC2.75□□□□□ -1.97
LTBQ06643 Y_RNA.401-201ENST00000383965 117 ntBASIC2.75□□□□□ -1.97
LTBQ06643 RNU6-1197P-201ENST00000391183 107 ntBASIC2.75□□□□□ -1.97
LTBQ06643 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LTBQ06643 AL591034.2-201ENST00000402839 359 ntBASIC2.75□□□□□ -1.97
LTBQ06643 AL590383.1-201ENST00000428602 75 ntBASIC2.75□□□□□ -1.97
LTBQ06643 AL078601.1-201ENST00000444542 271 ntBASIC2.75□□□□□ -1.97
LTBQ06643 AC013470.1-201ENST00000453438 462 ntBASIC2.75□□□□□ -1.97
LTBQ06643 AC133134.1-201ENST00000466800 359 ntBASIC2.75□□□□□ -1.97
LTBQ06643 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.75□□□□□ -1.97
LTBQ06643 RNU6-475P-201ENST00000516073 104 ntBASIC2.75□□□□□ -1.97
LTBQ06643 Y_RNA.687-201ENST00000516558 91 ntBASIC2.75□□□□□ -1.97
LTBQ06643 Y_RNA.721-201ENST00000517207 102 ntBASIC2.75□□□□□ -1.97
LTBQ06643 CASP1P1-201ENST00000526345 212 ntBASIC2.75□□□□□ -1.97
LTBQ06643 HSBP1P1-201ENST00000555205 166 ntBASIC2.75□□□□□ -1.97
LTBQ06643 MIR4524B-201ENST00000581569 115 ntBASIC2.75□□□□□ -1.97
LTBQ06643 MIR5188-201ENST00000583467 113 ntBASIC2.75□□□□□ -1.97
LTBQ06643 AP000787.2-201ENST00000604432 568 ntBASIC2.75□□□□□ -1.97
LTBQ06643 PRR13P7-201ENST00000605538 430 ntBASIC2.75□□□□□ -1.97
LTBQ06643 MIR1244-1-201ENST00000612829 85 ntBASIC2.75□□□□□ -1.97
LTBQ06643 HMGB1P24-202ENST00000615653 685 ntBASIC2.75□□□□□ -1.97
LTBQ06643 AL138880.2-201ENST00000616214 239 ntBASIC2.75□□□□□ -1.97
LTBQ06643 MIR6076-201ENST00000617521 113 ntBASIC2.75□□□□□ -1.97
LTBQ06643 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.75□□□□□ -1.97
LTBQ06643 MIR1244-3-201ENST00000635744 85 ntBASIC2.75□□□□□ -1.97
LTBQ06643 MIR4272-201ENST00000635924 64 ntBASIC2.75□□□□□ -1.97
LTBQ06643 MIR1244-2-201ENST00000636449 85 ntBASIC2.75□□□□□ -1.97
LTBQ06643 MIR1244-4-202ENST00000636813 85 ntBASIC2.75□□□□□ -1.97
LTBQ06643 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LTBQ06643 AC008669.1-201ENST00000565823 2178 ntBASIC2.74□□□□□ -1.97
LTBQ06643 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
LTBQ06643 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LTBQ06643 Z98749.2-208ENST00000381646 500 ntBASIC2.74□□□□□ -1.97
LTBQ06643 Y_RNA.512-201ENST00000384518 102 ntBASIC2.74□□□□□ -1.97
LTBQ06643 RNU6-140P-201ENST00000384566 108 ntBASIC2.74□□□□□ -1.97
LTBQ06643 RNU6-101P-201ENST00000410323 104 ntBASIC2.74□□□□□ -1.97
LTBQ06643 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.74□□□□□ -1.97
LTBQ06643 AC098614.2-201ENST00000426040 255 ntBASIC2.74□□□□□ -1.97
LTBQ06643 RPS15AP10-201ENST00000432472 382 ntBASIC2.74□□□□□ -1.97
LTBQ06643 RPL21P2-201ENST00000440049 481 ntBASIC2.74□□□□□ -1.97
LTBQ06643 AL731563.1-201ENST00000442202 214 ntBASIC2.74□□□□□ -1.97
LTBQ06643 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.74□□□□□ -1.97
LTBQ06643 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.74□□□□□ -1.97
LTBQ06643 AK3P2-201ENST00000507976 429 ntBASIC2.74□□□□□ -1.97
LTBQ06643 MRPS35P2-201ENST00000508242 191 ntBASIC2.74□□□□□ -1.97
LTBQ06643 AC010265.1-201ENST00000513509 211 ntBASIC2.74□□□□□ -1.97
LTBQ06643 RN7SKP43-201ENST00000516173 320 ntBASIC2.74□□□□□ -1.97
LTBQ06643 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.74□□□□□ -1.97
LTBQ06643 AC110588.1-201ENST00000559699 137 ntBASIC2.74□□□□□ -1.97
LTBQ06643 H3F3AP1-201ENST00000559984 334 ntBASIC2.74□□□□□ -1.97
LTBQ06643 MIR5696-201ENST00000578474 85 ntBASIC2.74□□□□□ -1.97
LTBQ06643 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.74□□□□□ -1.97
LTBQ06643 AC124312.5-201ENST00000604451 268 ntBASIC2.74□□□□□ -1.97
LTBQ06643 AC008962.1-201ENST00000605729 304 ntBASIC2.74□□□□□ -1.97
LTBQ06643 MIR8076-201ENST00000611401 83 ntBASIC2.74□□□□□ -1.97
LTBQ06643 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.74□□□□□ -1.97
LTBQ06643 U6.99-201ENST00000637524 83 ntBASIC2.74□□□□□ -1.97
LTBQ06643 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
LTBQ06643 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
LTBQ06643 GABRG2-229ENST00000641017 3628 ntBASIC2.74□□□□□ -1.97
LTBQ06643 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.74□□□□□ -1.97
LTBQ06643 AC108206.1-201ENST00000570186 4159 ntBASIC2.74□□□□□ -1.97
LTBQ06643 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
LTBQ06643 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
LTBQ06643 AC110774.1-201ENST00000623567 2018 ntBASIC2.73□□□□□ -1.97
LTBQ06643 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LTBQ06643 SNORD50.1-201ENST00000362987 71 ntBASIC2.73□□□□□ -1.97
LTBQ06643 Y_RNA.424-201ENST00000384063 103 ntBASIC2.73□□□□□ -1.97
LTBQ06643 RNU6-1109P-201ENST00000391187 107 ntBASIC2.73□□□□□ -1.97
LTBQ06643 RPS4XP3-201ENST00000398541 413 ntBASIC2.73□□□□□ -1.97
LTBQ06643 MTND3P9-201ENST00000429526 346 ntBASIC2.73□□□□□ -1.97
LTBQ06643 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LTBQ06643 NDUFB4P6-201ENST00000436819 366 ntBASIC2.73□□□□□ -1.97
LTBQ06643 AC010095.1-201ENST00000443543 144 ntBASIC2.73□□□□□ -1.97
LTBQ06643 AL590664.1-201ENST00000448065 339 ntBASIC2.73□□□□□ -1.97
LTBQ06643 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LTBQ06643 EEF1B2P7-201ENST00000451177 676 ntBASIC2.73□□□□□ -1.97
LTBQ06643 OR2AQ1P-201ENST00000451972 200 ntBASIC2.73□□□□□ -1.97
LTBQ06643 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.73□□□□□ -1.97
LTBQ06643 RNU7-169P-201ENST00000459456 61 ntBASIC2.73□□□□□ -1.97
LTBQ06643 RPS29P27-201ENST00000463711 170 ntBASIC2.73□□□□□ -1.97
LTBQ06643 RPL22P13-201ENST00000493291 347 ntBASIC2.73□□□□□ -1.97
LTBQ06643 AC114801.2-201ENST00000503825 781 ntBASIC2.73□□□□□ -1.97
LTBQ06643 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.73□□□□□ -1.97
LTBQ06643 SNORA31.1-201ENST00000515993 133 ntBASIC2.73□□□□□ -1.97
LTBQ06643 SNORA31.5-201ENST00000516190 133 ntBASIC2.73□□□□□ -1.97
LTBQ06643 RNU6-612P-201ENST00000516909 102 ntBASIC2.73□□□□□ -1.97
LTBQ06643 RNU6-703P-201ENST00000516946 107 ntBASIC2.73□□□□□ -1.97
LTBQ06643 AP005902.1-201ENST00000521358 186 ntBASIC2.73□□□□□ -1.97
LTBQ06643 AL161670.1-201ENST00000554348 137 ntBASIC2.73□□□□□ -1.97
LTBQ06643 AC091544.4-201ENST00000555268 342 ntBASIC2.73□□□□□ -1.97
LTBQ06643 CYCSP39-201ENST00000565821 309 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms