Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AP005902.1-201ENST00000521358 186 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 AC023050.3-201ENST00000541142 333 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 AC121758.2-201ENST00000553271 193 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 AC123912.5-201ENST00000605470 343 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 AC007792.1-201ENST00000623023 402 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
GABPAQ06546 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
GABPAQ06546 RNU6-212P-201ENST00000362642 104 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 RNU1-17P-201ENST00000363022 152 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 RNU6-266P-201ENST00000364225 107 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 RNA5SP240-201ENST00000365355 128 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 MIR544A-201ENST00000384855 91 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 CALM2P3-201ENST00000400429 449 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 SNORD56-201ENST00000413522 71 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.17□□□□□ -2.06
GABPAQ06546 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.17□□□□□ -2.06
GABPAQ06546 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.17□□□□□ -2.06
GABPAQ06546 DNAJC19P4-201ENST00000440115 345 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.17□□□□□ -2.06
GABPAQ06546 AL161788.1-201ENST00000441805 169 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 MTCO2P7-201ENST00000446518 666 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 PSPHP1-201ENST00000450062 261 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 AL031274.1-201ENST00000450334 232 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.17□□□□□ -2.06
GABPAQ06546 AC009646.1-201ENST00000510455 318 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 RNU1-40P-201ENST00000516816 164 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 RNU1-97P-201ENST00000516872 164 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 SNORA25.17-201ENST00000517184 124 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 MTCO3P23-201ENST00000561363 289 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 MIR4255-201ENST00000579351 72 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 MIR3683-201ENST00000580847 82 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 MIR3941-201ENST00000582572 103 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.17□□□□□ -2.06
GABPAQ06546 AC245884.12-201ENST00000615364 59 ntBASIC2.17□□□□□ -2.06
GABPAQ06546 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.17□□□□□ -2.06
GABPAQ06546 RNU6-1159P-201ENST00000362933 107 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 SNORA6-201ENST00000384033 151 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
GABPAQ06546 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.16□□□□□ -2.06
GABPAQ06546 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
GABPAQ06546 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.16□□□□□ -2.06
GABPAQ06546 MTND1P1-201ENST00000445453 368 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 RPL39P29-201ENST00000447779 157 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 RNU6-261P-201ENST00000459506 102 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 AC083798.1-201ENST00000472671 131 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 RNU6-1038P-201ENST00000516516 104 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 AC069113.1-201ENST00000517763 267 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 AC109479.2-201ENST00000517842 174 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.16□□□□□ -2.06
GABPAQ06546 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.16□□□□□ -2.06
GABPAQ06546 AC022880.1-201ENST00000534017 973 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.16□□□□□ -2.06
GABPAQ06546 AL512360.1-201ENST00000555346 234 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.16□□□□□ -2.06
GABPAQ06546 AL713866.2-201ENST00000603579 219 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 APOOP1-201ENST00000604695 592 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
GABPAQ06546 HULC.1-201ENST00000612720 240 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
GABPAQ06546 AL359880.1-201ENST00000621879 266 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 AC090517.3-201ENST00000625170 141 ntBASIC2.16□□□□□ -2.06
GABPAQ06546 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
GABPAQ06546 RNU6-655P-201ENST00000362858 107 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 RNU6-428P-201ENST00000362942 107 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 RNU6-623P-201ENST00000363143 105 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 U3.13-201ENST00000364804 214 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 RNU4-66P-201ENST00000365199 138 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 RNA5SP219-201ENST00000390940 113 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 RNU2-23P-201ENST00000410545 195 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 RNU6-1245P-201ENST00000411130 106 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 RNU6-293P-201ENST00000411259 106 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
GABPAQ06546 AIMP1P2-201ENST00000425294 312 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.15□□□□□ -2.07
GABPAQ06546 AC007969.2-201ENST00000441891 191 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.15□□□□□ -2.07
GABPAQ06546 MTCO3P38-201ENST00000468910 766 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.15□□□□□ -2.07
GABPAQ06546 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 CCDC34P1-201ENST00000507441 517 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.15□□□□□ -2.07
GABPAQ06546 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.15□□□□□ -2.07
GABPAQ06546 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.15□□□□□ -2.07
GABPAQ06546 RNU6-250P-201ENST00000516958 103 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 AC009127.3-201ENST00000570531 403 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 AC107304.1-201ENST00000604229 296 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 RNU6-85P-201ENST00000605989 107 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
GABPAQ06546 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.15□□□□□ -2.07
GABPAQ06546 Y_RNA.40-201ENST00000362645 93 ntBASIC2.14□□□□□ -2.07
GABPAQ06546 Y_RNA.41-201ENST00000362646 102 ntBASIC2.14□□□□□ -2.07
GABPAQ06546 RNU6-105P-201ENST00000363909 104 ntBASIC2.14□□□□□ -2.07
GABPAQ06546 RN7SKP158-201ENST00000410453 326 ntBASIC2.14□□□□□ -2.07
GABPAQ06546 AL589823.1-201ENST00000429577 183 ntBASIC2.14□□□□□ -2.07
GABPAQ06546 VN1R108P-201ENST00000431580 830 ntBASIC2.14□□□□□ -2.07
GABPAQ06546 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms