Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.63□□□□□ -2.15
CCNA1P78396 RPS15AP10-201ENST00000432472 382 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.63□□□□□ -2.15
CCNA1P78396 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.63□□□□□ -2.15
CCNA1P78396 AC117522.1-201ENST00000509821 380 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 SCARNA24.1-201ENST00000516465 137 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.63□□□□□ -2.15
CCNA1P78396 AC106038.2-201ENST00000520706 568 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.63□□□□□ -2.15
CCNA1P78396 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.63□□□□□ -2.15
CCNA1P78396 AP000654.2-201ENST00000605633 586 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 AL121992.2-201ENST00000606262 256 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 AC091304.9-201ENST00000612091 226 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 AC023510.2-201ENST00000622162 746 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 AC091895.1-201ENST00000624494 256 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 AC008993.2-201ENST00000631744 806 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CCNA1P78396 snoU2_19.1-201ENST00000362361 80 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 Y_RNA.191-201ENST00000363972 113 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 RNY4P34-201ENST00000364779 95 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 AL031577.2-201ENST00000404133 280 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 AL357139.1-201ENST00000407792 426 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 Y_RNA.598-201ENST00000410480 95 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 RNA5SP111-201ENST00000411386 101 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 EEF1A1P40-201ENST00000412883 573 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 Z99497.1-201ENST00000421282 135 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.62□□□□□ -2.15
CCNA1P78396 MTND5P25-201ENST00000430499 799 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 AL357134.1-201ENST00000445848 426 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 AC245517.4-201ENST00000448601 281 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 AL353752.1-201ENST00000454946 260 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 RNU6-333P-201ENST00000459117 107 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 snoU13.18-201ENST00000459483 104 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 AC096745.1-201ENST00000509945 370 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.62□□□□□ -2.15
CCNA1P78396 AC109446.2-201ENST00000567872 497 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 AL136363.2-201ENST00000604173 851 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 AL360219.1-201ENST00000610230 366 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 AL159153.1-201ENST00000619688 317 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 AL359740.1-201ENST00000624340 592 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 AC007494.3-201ENST00000624660 743 ntBASIC1.62□□□□□ -2.15
CCNA1P78396 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CCNA1P78396 Y_RNA.67-201ENST00000362870 100 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 U8.3-201ENST00000363321 132 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 RNU6-61P-201ENST00000365528 109 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 RNA5SP100-201ENST00000410903 110 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 RNA5SP59-201ENST00000410922 110 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 RNU6-195P-201ENST00000411352 109 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.61□□□□□ -2.15
CCNA1P78396 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
CCNA1P78396 MTND4P20-201ENST00000424125 869 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 AL360271.2-201ENST00000447710 161 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 ART2BP-201ENST00000453501 499 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.61□□□□□ -2.15
CCNA1P78396 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.61□□□□□ -2.15
CCNA1P78396 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.61□□□□□ -2.15
CCNA1P78396 AC025465.3-201ENST00000510570 311 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 RNA5SP102-201ENST00000516865 106 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 RNU2-46P-201ENST00000517038 113 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.61□□□□□ -2.15
CCNA1P78396 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.61□□□□□ -2.15
CCNA1P78396 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.61□□□□□ -2.15
CCNA1P78396 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.61□□□□□ -2.15
CCNA1P78396 AC091135.1-201ENST00000585943 307 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 AL133173.2-201ENST00000614270 90 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 AC008250.2-201ENST00000615261 205 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.61□□□□□ -2.15
CCNA1P78396 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CCNA1P78396 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
CCNA1P78396 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.6□□□□□ -2.15
CCNA1P78396 MTND4P4-201ENST00000439033 1366 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 MTND5P35-201ENST00000557537 1720 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
CCNA1P78396 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCNA1P78396 SNORD56.1-201ENST00000362913 68 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 RNU6-179P-201ENST00000363350 107 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 RNY1P12-201ENST00000364251 105 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 RNU6-384P-201ENST00000364900 104 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CCNA1P78396 C1DP2-201ENST00000418167 426 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.6□□□□□ -2.15
CCNA1P78396 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.6□□□□□ -2.15
CCNA1P78396 CALM2P2-201ENST00000428512 440 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 RPS6P15-201ENST00000431996 751 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 AC000111.3-201ENST00000433478 193 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.6□□□□□ -2.15
CCNA1P78396 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.6□□□□□ -2.15
CCNA1P78396 AL133217.1-201ENST00000450980 425 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 RPL36AP21-201ENST00000490372 323 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.6□□□□□ -2.15
CCNA1P78396 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.6□□□□□ -2.15
CCNA1P78396 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.6□□□□□ -2.15
CCNA1P78396 AC008521.1-201ENST00000587471 187 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 AC122133.1-201ENST00000613964 233 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 AC026585.1-201ENST00000619582 524 ntBASIC1.6□□□□□ -2.15
CCNA1P78396 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCNA1P78396 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms