Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNU7-14P-201ENST00000459331 62 ntBASIC0.17□□□□□ -2.38
RPS28P62857 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.17□□□□□ -2.38
RPS28P62857 RNU4-57P-201ENST00000515980 135 ntBASIC0.17□□□□□ -2.38
RPS28P62857 RNU6-947P-201ENST00000516264 106 ntBASIC0.17□□□□□ -2.38
RPS28P62857 RNU5F-4P-201ENST00000516581 114 ntBASIC0.17□□□□□ -2.38
RPS28P62857 RNU6-548P-201ENST00000517083 115 ntBASIC0.17□□□□□ -2.38
RPS28P62857 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.17□□□□□ -2.38
RPS28P62857 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.17□□□□□ -2.38
RPS28P62857 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.17□□□□□ -2.38
RPS28P62857 AL132657.2-201ENST00000564417 358 ntBASIC0.17□□□□□ -2.38
RPS28P62857 MIR5695-201ENST00000579717 85 ntBASIC0.17□□□□□ -2.38
RPS28P62857 MIR4303-201ENST00000581299 66 ntBASIC0.17□□□□□ -2.38
RPS28P62857 VN1R107P-201ENST00000601784 209 ntBASIC0.17□□□□□ -2.38
RPS28P62857 KC877982.1-201ENST00000602313 470 ntBASIC0.17□□□□□ -2.38
RPS28P62857 GHRLOS.1-201ENST00000610995 70 ntBASIC0.17□□□□□ -2.38
RPS28P62857 AC021506.2-201ENST00000612354 169 ntBASIC0.17□□□□□ -2.38
RPS28P62857 AC104985.3-201ENST00000623479 597 ntBASIC0.17□□□□□ -2.38
RPS28P62857 MIR5087-201ENST00000635826 76 ntBASIC0.17□□□□□ -2.38
RPS28P62857 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
RPS28P62857 SNORD99-201ENST00000408612 74 ntBASIC0.16□□□□□ -2.38
RPS28P62857 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.16□□□□□ -2.38
RPS28P62857 AC007969.2-201ENST00000441891 191 ntBASIC0.16□□□□□ -2.38
RPS28P62857 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.16□□□□□ -2.38
RPS28P62857 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.16□□□□□ -2.38
RPS28P62857 AC016925.1-201ENST00000458303 298 ntBASIC0.16□□□□□ -2.38
RPS28P62857 RNU7-90P-201ENST00000459216 62 ntBASIC0.16□□□□□ -2.38
RPS28P62857 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.16□□□□□ -2.38
RPS28P62857 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.16□□□□□ -2.38
RPS28P62857 AC011979.2-201ENST00000527568 352 ntBASIC0.16□□□□□ -2.38
RPS28P62857 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.16□□□□□ -2.38
RPS28P62857 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.16□□□□□ -2.38
RPS28P62857 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.16□□□□□ -2.38
RPS28P62857 MTND4P14-201ENST00000435799 1354 ntBASIC0.16□□□□□ -2.38
RPS28P62857 RNU6-1335P-201ENST00000365426 107 ntBASIC0.15□□□□□ -2.39
RPS28P62857 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.15□□□□□ -2.39
RPS28P62857 AP1B1P2-201ENST00000416196 106 ntBASIC0.15□□□□□ -2.39
RPS28P62857 RSL24D1P8-201ENST00000434442 492 ntBASIC0.15□□□□□ -2.39
RPS28P62857 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.15□□□□□ -2.39
RPS28P62857 COX6CP14-201ENST00000469580 174 ntBASIC0.15□□□□□ -2.39
RPS28P62857 AC022447.4-201ENST00000504053 364 ntBASIC0.15□□□□□ -2.39
RPS28P62857 AC104806.1-201ENST00000508720 308 ntBASIC0.15□□□□□ -2.39
RPS28P62857 RN7SKP12-201ENST00000516275 143 ntBASIC0.15□□□□□ -2.39
RPS28P62857 RNU6-856P-201ENST00000516959 98 ntBASIC0.15□□□□□ -2.39
RPS28P62857 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.15□□□□□ -2.39
RPS28P62857 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.15□□□□□ -2.39
RPS28P62857 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.15□□□□□ -2.39
RPS28P62857 CYP4A27P-201ENST00000567218 190 ntBASIC0.15□□□□□ -2.39
RPS28P62857 MIR4781-201ENST00000585250 76 ntBASIC0.15□□□□□ -2.39
RPS28P62857 AL929325.1-201ENST00000603096 117 ntBASIC0.15□□□□□ -2.39
RPS28P62857 AC017083.3-201ENST00000609955 700 ntBASIC0.15□□□□□ -2.39
RPS28P62857 AL353149.1-201ENST00000610667 244 ntBASIC0.15□□□□□ -2.39
RPS28P62857 AC104073.3-201ENST00000610942 955 ntBASIC0.15□□□□□ -2.39
RPS28P62857 AC116165.2-201ENST00000616705 206 ntBASIC0.15□□□□□ -2.39
RPS28P62857 AL731566.2-201ENST00000618971 317 ntBASIC0.15□□□□□ -2.39
RPS28P62857 AC026585.1-201ENST00000619582 524 ntBASIC0.15□□□□□ -2.39
RPS28P62857 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
RPS28P62857 RNU6-877P-201ENST00000383868 107 ntBASIC0.14□□□□□ -2.39
RPS28P62857 RNU6-17P-201ENST00000384245 107 ntBASIC0.14□□□□□ -2.39
RPS28P62857 RNU6-505P-201ENST00000384427 107 ntBASIC0.14□□□□□ -2.39
RPS28P62857 RNU6-18P-201ENST00000384527 107 ntBASIC0.14□□□□□ -2.39
RPS28P62857 AL603865.2-201ENST00000401679 213 ntBASIC0.14□□□□□ -2.39
RPS28P62857 Z92545.1-201ENST00000411782 234 ntBASIC0.14□□□□□ -2.39
RPS28P62857 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.14□□□□□ -2.39
RPS28P62857 ELOCP17-201ENST00000414751 326 ntBASIC0.14□□□□□ -2.39
RPS28P62857 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.14□□□□□ -2.39
RPS28P62857 AL163973.1-201ENST00000484753 577 ntBASIC0.14□□□□□ -2.39
RPS28P62857 AC011406.1-201ENST00000512440 370 ntBASIC0.14□□□□□ -2.39
RPS28P62857 SNORA68.3-201ENST00000515906 83 ntBASIC0.14□□□□□ -2.39
RPS28P62857 RNU6-113P-201ENST00000516653 101 ntBASIC0.14□□□□□ -2.39
RPS28P62857 AC004812.1-201ENST00000540773 146 ntBASIC0.14□□□□□ -2.39
RPS28P62857 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.14□□□□□ -2.39
RPS28P62857 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC0.14□□□□□ -2.39
RPS28P62857 AC012507.3-201ENST00000603556 477 ntBASIC0.14□□□□□ -2.39
RPS28P62857 AC092574.1-201ENST00000609771 420 ntBASIC0.14□□□□□ -2.39
RPS28P62857 AC106754.2-201ENST00000623006 233 ntBASIC0.14□□□□□ -2.39
RPS28P62857 CASC19-280ENST00000642102 1351 ntBASIC0.14□□□□□ -2.39
RPS28P62857 AL391987.6-201ENST00000305671 199 ntBASIC0.13□□□□□ -2.39
RPS28P62857 RNU6-78P-201ENST00000362897 107 ntBASIC0.13□□□□□ -2.39
RPS28P62857 Y_RNA.132-201ENST00000363421 102 ntBASIC0.13□□□□□ -2.39
RPS28P62857 RNU6-527P-201ENST00000363425 104 ntBASIC0.13□□□□□ -2.39
RPS28P62857 RNU6-236P-201ENST00000363886 106 ntBASIC0.13□□□□□ -2.39
RPS28P62857 RNU4-56P-201ENST00000364700 142 ntBASIC0.13□□□□□ -2.39
RPS28P62857 SNORA18.2-201ENST00000383865 132 ntBASIC0.13□□□□□ -2.39
RPS28P62857 RNU6-142P-201ENST00000384019 107 ntBASIC0.13□□□□□ -2.39
RPS28P62857 SNORA70B-201ENST00000384210 135 ntBASIC0.13□□□□□ -2.39
RPS28P62857 RNU6-348P-201ENST00000384386 107 ntBASIC0.13□□□□□ -2.39
RPS28P62857 MIR23B-201ENST00000384832 97 ntBASIC0.13□□□□□ -2.39
RPS28P62857 SNORA16.2-201ENST00000390991 127 ntBASIC0.13□□□□□ -2.39
RPS28P62857 MIR1284-201ENST00000408337 120 ntBASIC0.13□□□□□ -2.39
RPS28P62857 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.13□□□□□ -2.39
RPS28P62857 VPS26BP1-201ENST00000417155 755 ntBASIC0.13□□□□□ -2.39
RPS28P62857 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.13□□□□□ -2.39
RPS28P62857 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.13□□□□□ -2.39
RPS28P62857 RPL39P39-201ENST00000455840 151 ntBASIC0.13□□□□□ -2.39
RPS28P62857 RNU7-21P-201ENST00000459430 62 ntBASIC0.13□□□□□ -2.39
RPS28P62857 AC104982.1-201ENST00000478775 574 ntBASIC0.13□□□□□ -2.39
RPS28P62857 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.13□□□□□ -2.39
RPS28P62857 ARL2BPP4-201ENST00000506854 471 ntBASIC0.13□□□□□ -2.39
RPS28P62857 MTCO3P9-201ENST00000506989 781 ntBASIC0.13□□□□□ -2.39
RPS28P62857 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms