Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC074085.1-201ENST00000413598 418 ntBASIC3.09□□□□□ -1.91
TM4SF4P48230 AL590632.1-201ENST00000424289 371 ntBASIC3.09□□□□□ -1.91
TM4SF4P48230 MTND3P9-201ENST00000429526 346 ntBASIC3.09□□□□□ -1.91
TM4SF4P48230 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.09□□□□□ -1.91
TM4SF4P48230 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.09□□□□□ -1.91
TM4SF4P48230 AC112220.1-201ENST00000434628 355 ntBASIC3.09□□□□□ -1.91
TM4SF4P48230 DAP3P1-201ENST00000441522 278 ntBASIC3.09□□□□□ -1.91
TM4SF4P48230 MTND4P18-201ENST00000447010 465 ntBASIC3.09□□□□□ -1.91
TM4SF4P48230 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.09□□□□□ -1.91
TM4SF4P48230 RPS27P27-201ENST00000498779 255 ntBASIC3.09□□□□□ -1.91
TM4SF4P48230 RNU2-53P-201ENST00000516257 147 ntBASIC3.09□□□□□ -1.91
TM4SF4P48230 RNU6-1088P-201ENST00000516850 104 ntBASIC3.09□□□□□ -1.91
TM4SF4P48230 AP005639.2-201ENST00000527592 928 ntBASIC3.09□□□□□ -1.91
TM4SF4P48230 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.09□□□□□ -1.91
TM4SF4P48230 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.09□□□□□ -1.91
TM4SF4P48230 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.09□□□□□ -1.91
TM4SF4P48230 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.09□□□□□ -1.91
TM4SF4P48230 POLR3GP2-201ENST00000588366 668 ntBASIC3.09□□□□□ -1.91
TM4SF4P48230 AL356280.1-201ENST00000603614 379 ntBASIC3.09□□□□□ -1.91
TM4SF4P48230 AC124303.1-201ENST00000605703 360 ntBASIC3.09□□□□□ -1.91
TM4SF4P48230 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
TM4SF4P48230 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
TM4SF4P48230 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TM4SF4P48230 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.92
TM4SF4P48230 AC009541.1-201ENST00000438279 2662 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TM4SF4P48230 RNU1-75P-201ENST00000347264 129 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 Y_RNA.301-201ENST00000364990 103 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 RNU6-142P-201ENST00000384019 107 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 MIR517A-201ENST00000385001 87 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TM4SF4P48230 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TM4SF4P48230 RNU2-25P-201ENST00000411041 191 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 AL590556.1-201ENST00000423231 483 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 RPL30P4-201ENST00000429309 333 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 AC092427.1-202ENST00000430569 476 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.08□□□□□ -1.92
TM4SF4P48230 RNU7-187P-201ENST00000458985 68 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 AC073901.1-201ENST00000462471 408 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 RPS27AP9-201ENST00000477681 438 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 AC140059.1-201ENST00000489238 361 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 HMGN1P12-201ENST00000499125 195 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 AC016632.1-201ENST00000503994 196 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.08□□□□□ -1.92
TM4SF4P48230 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.08□□□□□ -1.92
TM4SF4P48230 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TM4SF4P48230 HSPE1P4-201ENST00000550617 308 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.08□□□□□ -1.92
TM4SF4P48230 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.08□□□□□ -1.92
TM4SF4P48230 ZNF861P-201ENST00000588126 639 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 AL355073.2-201ENST00000612106 557 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 AC104237.2-201ENST00000612456 443 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.08□□□□□ -1.92
TM4SF4P48230 TPTEP1-208ENST00000636884 213 ntBASIC3.08□□□□□ -1.92
TM4SF4P48230 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TM4SF4P48230 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TM4SF4P48230 ZNF72P-201ENST00000425869 1908 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.07□□□□□ -1.92
TM4SF4P48230 RNU6-1210P-201ENST00000363775 107 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 SET-203ENST00000372688 801 ntTSL 2 BASIC3.07□□□□□ -1.92
TM4SF4P48230 MIR27B-201ENST00000385129 97 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 RNU6-1009P-201ENST00000390996 107 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.07□□□□□ -1.92
TM4SF4P48230 CYCSP48-201ENST00000417124 323 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 EIF1AXP1-201ENST00000419267 435 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.07□□□□□ -1.92
TM4SF4P48230 RPL21P2-201ENST00000440049 481 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 AC093019.1-201ENST00000443135 252 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.07□□□□□ -1.92
TM4SF4P48230 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 AC080013.2-201ENST00000460866 323 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 AC103851.1-201ENST00000506833 274 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 RNU6-548P-201ENST00000517083 115 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 RNA5SP380-201ENST00000517190 98 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.07□□□□□ -1.92
TM4SF4P48230 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.07□□□□□ -1.92
TM4SF4P48230 AL133215.3-201ENST00000609801 448 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 AC090115.4-201ENST00000609970 188 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 AC025253.1-201ENST00000613623 543 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 MIR6128-201ENST00000615528 109 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 U4.3-201ENST00000621047 82 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 MIR7153-201ENST00000637758 57 ntBASIC3.07□□□□□ -1.92
TM4SF4P48230 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TM4SF4P48230 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TM4SF4P48230 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TM4SF4P48230 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TM4SF4P48230 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.06□□□□□ -1.92
TM4SF4P48230 AC092268.1-201ENST00000342691 405 ntBASIC3.06□□□□□ -1.92
TM4SF4P48230 MIR26A1-201ENST00000362205 77 ntBASIC3.06□□□□□ -1.92
TM4SF4P48230 RNU6-529P-201ENST00000363383 104 ntBASIC3.06□□□□□ -1.92
TM4SF4P48230 RNU6-43P-201ENST00000384302 107 ntBASIC3.06□□□□□ -1.92
TM4SF4P48230 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.06□□□□□ -1.92
TM4SF4P48230 MIR548F5-201ENST00000408421 86 ntBASIC3.06□□□□□ -1.92
TM4SF4P48230 RPL37P10-201ENST00000412884 288 ntBASIC3.06□□□□□ -1.92
TM4SF4P48230 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.06□□□□□ -1.92
TM4SF4P48230 RPL31P12-201ENST00000422587 358 ntBASIC3.06□□□□□ -1.92
TM4SF4P48230 DPH3P2-201ENST00000422618 250 ntBASIC3.06□□□□□ -1.92
TM4SF4P48230 EIF4EP4-201ENST00000424916 578 ntBASIC3.06□□□□□ -1.92
TM4SF4P48230 Z82205.1-201ENST00000428456 297 ntBASIC3.06□□□□□ -1.92
TM4SF4P48230 MTND5P27-201ENST00000428871 1720 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms