Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCNFP41002 AC092628.2-201ENST00000622492 339 ntBASIC3.81□□□□□ -1.8
CCNFP41002 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNFP41002 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCNFP41002 CEP170P1-201ENST00000502249 4587 ntBASIC3.81□□□□□ -1.8
CCNFP41002 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.81□□□□□ -1.8
CCNFP41002 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNFP41002 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNFP41002 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNFP41002 MIR372-201ENST00000362225 67 ntBASIC3.8□□□□□ -1.8
CCNFP41002 RNU6-19P-201ENST00000384718 107 ntBASIC3.8□□□□□ -1.8
CCNFP41002 MIR549A-201ENST00000385268 96 ntBASIC3.8□□□□□ -1.8
CCNFP41002 SNORA53-201ENST00000391141 249 ntBASIC3.8□□□□□ -1.8
CCNFP41002 AC023141.4-201ENST00000412031 328 ntBASIC3.8□□□□□ -1.8
CCNFP41002 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.8□□□□□ -1.8
CCNFP41002 AC012306.1-201ENST00000423267 114 ntBASIC3.8□□□□□ -1.8
CCNFP41002 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNFP41002 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNFP41002 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNFP41002 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNFP41002 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNFP41002 AP000705.1-201ENST00000454567 350 ntBASIC3.8□□□□□ -1.8
CCNFP41002 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNFP41002 PRELID3BP1-201ENST00000457142 540 ntBASIC3.8□□□□□ -1.8
CCNFP41002 U3.44-201ENST00000458938 192 ntBASIC3.8□□□□□ -1.8
CCNFP41002 RPL23AP62-201ENST00000463396 453 ntBASIC3.8□□□□□ -1.8
CCNFP41002 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNFP41002 SEPT14P8-201ENST00000508026 178 ntBASIC3.8□□□□□ -1.8
CCNFP41002 RRN3P3-201ENST00000549207 578 ntBASIC3.8□□□□□ -1.8
CCNFP41002 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNFP41002 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CCNFP41002 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNFP41002 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNFP41002 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNFP41002 HAUS6P2-201ENST00000433254 2404 ntBASIC3.8□□□□□ -1.8
CCNFP41002 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNFP41002 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNFP41002 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.79□□□□□ -1.8
CCNFP41002 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNFP41002 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CCNFP41002 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
CCNFP41002 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNFP41002 RNU6-626P-201ENST00000363354 107 ntBASIC3.79□□□□□ -1.8
CCNFP41002 RNU6-873P-201ENST00000363833 107 ntBASIC3.79□□□□□ -1.8
CCNFP41002 Y_RNA.286-201ENST00000364813 102 ntBASIC3.79□□□□□ -1.8
CCNFP41002 Y_RNA.297-201ENST00000364950 91 ntBASIC3.79□□□□□ -1.8
CCNFP41002 RNA5SP283-201ENST00000365604 119 ntBASIC3.79□□□□□ -1.8
CCNFP41002 SNORD63-201ENST00000384262 68 ntBASIC3.79□□□□□ -1.8
CCNFP41002 RNU6-622P-201ENST00000384272 103 ntBASIC3.79□□□□□ -1.8
CCNFP41002 U3.19-201ENST00000390893 196 ntBASIC3.79□□□□□ -1.8
CCNFP41002 PTGES3P4-201ENST00000426243 356 ntBASIC3.79□□□□□ -1.8
CCNFP41002 AL358075.3-201ENST00000426289 226 ntBASIC3.79□□□□□ -1.8
CCNFP41002 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.79□□□□□ -1.8
CCNFP41002 SETP5-201ENST00000437270 562 ntBASIC3.79□□□□□ -1.8
CCNFP41002 AC010095.1-201ENST00000443543 144 ntBASIC3.79□□□□□ -1.8
CCNFP41002 RN7SL132P-201ENST00000478131 296 ntBASIC3.79□□□□□ -1.8
CCNFP41002 AC090525.1-201ENST00000479116 478 ntBASIC3.79□□□□□ -1.8
CCNFP41002 RPS23P5-201ENST00000495419 428 ntBASIC3.79□□□□□ -1.8
CCNFP41002 AC026402.1-201ENST00000513642 170 ntBASIC3.79□□□□□ -1.8
CCNFP41002 RNU4-71P-201ENST00000516258 113 ntBASIC3.79□□□□□ -1.8
CCNFP41002 SNORD19.2-201ENST00000516978 73 ntBASIC3.79□□□□□ -1.8
CCNFP41002 SNORA81.3-201ENST00000517283 198 ntBASIC3.79□□□□□ -1.8
CCNFP41002 AC105137.2-201ENST00000569073 466 ntBASIC3.79□□□□□ -1.8
CCNFP41002 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNFP41002 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.79□□□□□ -1.8
CCNFP41002 AC037487.3-201ENST00000606668 112 ntBASIC3.79□□□□□ -1.8
CCNFP41002 SNORD113-5-201ENST00000607261 78 ntBASIC3.79□□□□□ -1.8
CCNFP41002 MIR92B-201ENST00000607575 96 ntBASIC3.79□□□□□ -1.8
CCNFP41002 AL365434.2-201ENST00000607979 234 ntBASIC3.79□□□□□ -1.8
CCNFP41002 AC098479.1-201ENST00000609225 154 ntBASIC3.79□□□□□ -1.8
CCNFP41002 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.79□□□□□ -1.8
CCNFP41002 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.79□□□□□ -1.8
CCNFP41002 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.79□□□□□ -1.8
CCNFP41002 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.78□□□□□ -1.8
CCNFP41002 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCNFP41002 AC135776.4-201ENST00000624300 1904 ntBASIC3.78□□□□□ -1.8
CCNFP41002 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCNFP41002 Y_RNA.274-201ENST00000364714 101 ntBASIC3.78□□□□□ -1.8
CCNFP41002 RNU6-213P-201ENST00000384051 104 ntBASIC3.78□□□□□ -1.8
CCNFP41002 RNU6-20P-201ENST00000384106 107 ntBASIC3.78□□□□□ -1.8
CCNFP41002 MIR184-201ENST00000384962 84 ntBASIC3.78□□□□□ -1.8
CCNFP41002 MIR329-1-201ENST00000385028 80 ntBASIC3.78□□□□□ -1.8
CCNFP41002 RNU5A-5P-201ENST00000411054 116 ntBASIC3.78□□□□□ -1.8
CCNFP41002 RNU5B-3P-201ENST00000516601 115 ntBASIC3.78□□□□□ -1.8
CCNFP41002 SNORA31.21-201ENST00000517180 77 ntBASIC3.78□□□□□ -1.8
CCNFP41002 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.78□□□□□ -1.8
CCNFP41002 CYCSP30-201ENST00000546447 172 ntBASIC3.78□□□□□ -1.8
CCNFP41002 MIR4738-201ENST00000579134 87 ntBASIC3.78□□□□□ -1.8
CCNFP41002 KLKP1-201ENST00000595979 403 ntBASIC3.78□□□□□ -1.8
CCNFP41002 U2.14-201ENST00000615943 113 ntBASIC3.78□□□□□ -1.8
CCNFP41002 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.78□□□□□ -1.8
CCNFP41002 ZNF204P-201ENST00000416749 2397 ntBASIC3.78□□□□□ -1.8
CCNFP41002 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.78□□□□□ -1.8
CCNFP41002 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CCNFP41002 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CCNFP41002 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
CCNFP41002 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.77□□□□□ -1.81
CCNFP41002 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCNFP41002 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.77□□□□□ -1.81
CCNFP41002 RNU6-1285P-201ENST00000363480 105 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms