Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNU6-5P-201ENST00000384238 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-3P-201ENST00000384314 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-16P-201ENST00000384385 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-348P-201ENST00000384386 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-15P-201ENST00000384534 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-2-201ENST00000384627 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-29P-201ENST00000384637 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-9-201ENST00000384776 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-33P-201ENST00000384793 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 SNORA16.2-201ENST00000390991 127 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNA5SP465-201ENST00000391195 109 ntBASIC1.65□□□□□ -2.15
RORAP35398 RN7SKP142-201ENST00000411236 328 ntBASIC1.65□□□□□ -2.15
RORAP35398 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.65□□□□□ -2.15
RORAP35398 PIGFP2-201ENST00000421400 651 ntBASIC1.65□□□□□ -2.15
RORAP35398 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.65□□□□□ -2.15
RORAP35398 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.65□□□□□ -2.15
RORAP35398 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.65□□□□□ -2.15
RORAP35398 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.65□□□□□ -2.15
RORAP35398 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.65□□□□□ -2.15
RORAP35398 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.65□□□□□ -2.15
RORAP35398 AC022616.8-201ENST00000533569 253 ntBASIC1.65□□□□□ -2.15
RORAP35398 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.65□□□□□ -2.15
RORAP35398 AC018630.3-201ENST00000542637 96 ntBASIC1.65□□□□□ -2.15
RORAP35398 AL158211.1-201ENST00000566763 763 ntBASIC1.65□□□□□ -2.15
RORAP35398 MIR3618-201ENST00000580330 88 ntBASIC1.65□□□□□ -2.15
RORAP35398 AC091135.1-201ENST00000585943 307 ntBASIC1.65□□□□□ -2.15
RORAP35398 NIFKP6-201ENST00000598115 845 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.65□□□□□ -2.15
RORAP35398 AL590229.1-201ENST00000603497 542 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-6P-201ENST00000606623 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 AC004908.3-201ENST00000610248 625 ntBASIC1.65□□□□□ -2.15
RORAP35398 AP000770.2-201ENST00000623694 100 ntBASIC1.65□□□□□ -2.15
RORAP35398 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.65□□□□□ -2.15
RORAP35398 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RORAP35398 AP000568.1-201ENST00000282964 442 ntBASIC1.64□□□□□ -2.15
RORAP35398 Y_RNA.140-201ENST00000363474 103 ntBASIC1.64□□□□□ -2.15
RORAP35398 RNU4-42P-201ENST00000364738 142 ntBASIC1.64□□□□□ -2.15
RORAP35398 RNU6-456P-201ENST00000384493 107 ntBASIC1.64□□□□□ -2.15
RORAP35398 RNU6-1127P-201ENST00000384580 107 ntBASIC1.64□□□□□ -2.15
RORAP35398 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.64□□□□□ -2.15
RORAP35398 MTCO2P11-201ENST00000431069 680 ntBASIC1.64□□□□□ -2.15
RORAP35398 AL358934.1-201ENST00000432346 324 ntBASIC1.64□□□□□ -2.15
RORAP35398 AL591043.1-201ENST00000432461 424 ntBASIC1.64□□□□□ -2.15
RORAP35398 AL645568.3-201ENST00000433683 316 ntBASIC1.64□□□□□ -2.15
RORAP35398 KATNBL1P3-201ENST00000443475 909 ntBASIC1.64□□□□□ -2.15
RORAP35398 USP9YP29-201ENST00000445112 563 ntBASIC1.64□□□□□ -2.15
RORAP35398 RPL39P29-201ENST00000447779 157 ntBASIC1.64□□□□□ -2.15
RORAP35398 AC132479.1-201ENST00000449160 144 ntBASIC1.64□□□□□ -2.15
RORAP35398 C1DP4-201ENST00000455429 424 ntBASIC1.64□□□□□ -2.15
RORAP35398 PRELID3BP1-201ENST00000457142 540 ntBASIC1.64□□□□□ -2.15
RORAP35398 AC027575.1-201ENST00000481064 460 ntBASIC1.64□□□□□ -2.15
RORAP35398 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
RORAP35398 AC117532.1-201ENST00000514638 323 ntBASIC1.64□□□□□ -2.15
RORAP35398 RNU2-69P-201ENST00000516061 100 ntBASIC1.64□□□□□ -2.15
RORAP35398 RNU6-965P-201ENST00000516721 96 ntBASIC1.64□□□□□ -2.15
RORAP35398 SNORA44.1-201ENST00000517031 108 ntBASIC1.64□□□□□ -2.15
RORAP35398 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.64□□□□□ -2.15
RORAP35398 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.64□□□□□ -2.15
RORAP35398 AC025449.1-201ENST00000603896 529 ntBASIC1.64□□□□□ -2.15
RORAP35398 AC008945.2-201ENST00000606056 604 ntBASIC1.64□□□□□ -2.15
RORAP35398 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.64□□□□□ -2.15
RORAP35398 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
RORAP35398 U1.36-201ENST00000620684 176 ntBASIC1.64□□□□□ -2.15
RORAP35398 AC009161.2-201ENST00000624626 138 ntBASIC1.64□□□□□ -2.15
RORAP35398 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.64□□□□□ -2.15
RORAP35398 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
RORAP35398 RNU6-1285P-201ENST00000363480 105 ntBASIC1.63□□□□□ -2.15
RORAP35398 Y_RNA.159-201ENST00000363674 87 ntBASIC1.63□□□□□ -2.15
RORAP35398 RNU6-457P-201ENST00000363999 107 ntBASIC1.63□□□□□ -2.15
RORAP35398 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RORAP35398 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
RORAP35398 RNU4-46P-201ENST00000410818 138 ntBASIC1.63□□□□□ -2.15
RORAP35398 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.63□□□□□ -2.15
RORAP35398 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.63□□□□□ -2.15
RORAP35398 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.63□□□□□ -2.15
RORAP35398 AC108667.1-201ENST00000428618 249 ntBASIC1.63□□□□□ -2.15
RORAP35398 RPS15AP10-201ENST00000432472 382 ntBASIC1.63□□□□□ -2.15
RORAP35398 MTND1P26-201ENST00000440488 538 ntBASIC1.63□□□□□ -2.15
RORAP35398 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.63□□□□□ -2.15
RORAP35398 AC243964.1-201ENST00000441814 261 ntBASIC1.63□□□□□ -2.15
RORAP35398 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.63□□□□□ -2.15
RORAP35398 MTND2P33-201ENST00000506452 1031 ntBASIC1.63□□□□□ -2.15
RORAP35398 MTCO3P7-201ENST00000510008 774 ntBASIC1.63□□□□□ -2.15
RORAP35398 AC009646.1-201ENST00000510455 318 ntBASIC1.63□□□□□ -2.15
RORAP35398 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.63□□□□□ -2.15
RORAP35398 RNU6-430P-201ENST00000517078 107 ntBASIC1.63□□□□□ -2.15
RORAP35398 SNORA25.17-201ENST00000517184 124 ntBASIC1.63□□□□□ -2.15
RORAP35398 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.63□□□□□ -2.15
RORAP35398 AP002963.1-201ENST00000530590 184 ntBASIC1.63□□□□□ -2.15
RORAP35398 CBX3P4-201ENST00000538909 354 ntBASIC1.63□□□□□ -2.15
RORAP35398 AC023050.3-201ENST00000541142 333 ntBASIC1.63□□□□□ -2.15
RORAP35398 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.63□□□□□ -2.15
RORAP35398 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
RORAP35398 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.63□□□□□ -2.15
RORAP35398 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.63□□□□□ -2.15
RORAP35398 AC040904.1-201ENST00000590850 223 ntBASIC1.63□□□□□ -2.15
RORAP35398 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.63□□□□□ -2.15
RORAP35398 AP001596.2-201ENST00000608410 312 ntBASIC1.63□□□□□ -2.15
RORAP35398 AC022418.1-201ENST00000624118 445 ntBASIC1.63□□□□□ -2.15
RORAP35398 RNU6-428P-201ENST00000362942 107 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms