Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.59□□□□□ -1.99
ABCD3P28288 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.59□□□□□ -1.99
ABCD3P28288 PCMTD1P1-201ENST00000455560 355 ntBASIC2.59□□□□□ -1.99
ABCD3P28288 MTND1P11-201ENST00000456661 876 ntBASIC2.59□□□□□ -1.99
ABCD3P28288 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.59□□□□□ -1.99
ABCD3P28288 AC090525.1-201ENST00000479116 478 ntBASIC2.59□□□□□ -1.99
ABCD3P28288 RNA5SP367-201ENST00000516557 118 ntBASIC2.59□□□□□ -1.99
ABCD3P28288 RNA5SP454-201ENST00000517231 127 ntBASIC2.59□□□□□ -1.99
ABCD3P28288 CBX3P7-201ENST00000532876 502 ntBASIC2.59□□□□□ -1.99
ABCD3P28288 LARP7P3-201ENST00000579888 337 ntBASIC2.59□□□□□ -1.99
ABCD3P28288 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ABCD3P28288 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.59□□□□□ -1.99
ABCD3P28288 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.59□□□□□ -1.99
ABCD3P28288 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ABCD3P28288 AC069528.2-201ENST00000624849 1991 ntBASIC2.59□□□□□ -2
ABCD3P28288 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
ABCD3P28288 CBX3P1-201ENST00000325243 554 ntBASIC2.58□□□□□ -2
ABCD3P28288 SNORD62.1-201ENST00000362541 86 ntBASIC2.58□□□□□ -2
ABCD3P28288 RNU6-1032P-201ENST00000384100 107 ntBASIC2.58□□□□□ -2
ABCD3P28288 RNU6-767P-201ENST00000384132 107 ntBASIC2.58□□□□□ -2
ABCD3P28288 RNU6-790P-201ENST00000384479 105 ntBASIC2.58□□□□□ -2
ABCD3P28288 Y_RNA.504-201ENST00000384481 104 ntBASIC2.58□□□□□ -2
ABCD3P28288 RNU6-1274P-201ENST00000384557 107 ntBASIC2.58□□□□□ -2
ABCD3P28288 MT-TL1-201ENST00000386347 75 ntBASIC2.58□□□□□ -2
ABCD3P28288 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.58□□□□□ -2
ABCD3P28288 RNU6-876P-201ENST00000391295 104 ntBASIC2.58□□□□□ -2
ABCD3P28288 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ABCD3P28288 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.58□□□□□ -2
ABCD3P28288 HMGB3P2-201ENST00000411913 584 ntBASIC2.58□□□□□ -2
ABCD3P28288 Z82209.1-201ENST00000422141 2135 ntBASIC2.58□□□□□ -2
ABCD3P28288 AL590632.1-201ENST00000424289 371 ntBASIC2.58□□□□□ -2
ABCD3P28288 AC087499.2-201ENST00000432861 149 ntBASIC2.58□□□□□ -2
ABCD3P28288 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.58□□□□□ -2
ABCD3P28288 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.58□□□□□ -2
ABCD3P28288 AC008571.1-201ENST00000467232 300 ntBASIC2.58□□□□□ -2
ABCD3P28288 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.58□□□□□ -2
ABCD3P28288 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.58□□□□□ -2
ABCD3P28288 AC091874.1-201ENST00000511402 339 ntBASIC2.58□□□□□ -2
ABCD3P28288 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.58□□□□□ -2
ABCD3P28288 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.58□□□□□ -2
ABCD3P28288 RNU6-566P-201ENST00000516790 107 ntBASIC2.58□□□□□ -2
ABCD3P28288 RNU6-826P-201ENST00000516827 104 ntBASIC2.58□□□□□ -2
ABCD3P28288 RNU6-273P-201ENST00000516937 96 ntBASIC2.58□□□□□ -2
ABCD3P28288 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.58□□□□□ -2
ABCD3P28288 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.58□□□□□ -2
ABCD3P28288 AC018630.3-201ENST00000542637 96 ntBASIC2.58□□□□□ -2
ABCD3P28288 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.58□□□□□ -2
ABCD3P28288 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.58□□□□□ -2
ABCD3P28288 MIR4742-201ENST00000581069 85 ntBASIC2.58□□□□□ -2
ABCD3P28288 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.58□□□□□ -2
ABCD3P28288 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.58□□□□□ -2
ABCD3P28288 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.58□□□□□ -2
ABCD3P28288 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.58□□□□□ -2
ABCD3P28288 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ABCD3P28288 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.57□□□□□ -2
ABCD3P28288 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.57□□□□□ -2
ABCD3P28288 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.57□□□□□ -2
ABCD3P28288 Y_RNA.279-201ENST00000364763 95 ntBASIC2.57□□□□□ -2
ABCD3P28288 Y_RNA.301-201ENST00000364990 103 ntBASIC2.57□□□□□ -2
ABCD3P28288 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
ABCD3P28288 MIR181A2-201ENST00000384863 110 ntBASIC2.57□□□□□ -2
ABCD3P28288 MIR521-1-201ENST00000384902 87 ntBASIC2.57□□□□□ -2
ABCD3P28288 MTND1P23-201ENST00000416931 372 ntBASIC2.57□□□□□ -2
ABCD3P28288 AC112220.1-201ENST00000434628 355 ntBASIC2.57□□□□□ -2
ABCD3P28288 RPS29P6-201ENST00000438196 145 ntBASIC2.57□□□□□ -2
ABCD3P28288 AC105272.1-201ENST00000438604 198 ntBASIC2.57□□□□□ -2
ABCD3P28288 AC009238.1-201ENST00000442165 424 ntBASIC2.57□□□□□ -2
ABCD3P28288 AC025750.2-201ENST00000442609 450 ntBASIC2.57□□□□□ -2
ABCD3P28288 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.57□□□□□ -2
ABCD3P28288 AC009237.6-201ENST00000446969 424 ntBASIC2.57□□□□□ -2
ABCD3P28288 RNU6-1088P-201ENST00000516850 104 ntBASIC2.57□□□□□ -2
ABCD3P28288 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.57□□□□□ -2
ABCD3P28288 AP005639.2-201ENST00000527592 928 ntBASIC2.57□□□□□ -2
ABCD3P28288 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.57□□□□□ -2
ABCD3P28288 ZNF861P-201ENST00000588126 639 ntBASIC2.57□□□□□ -2
ABCD3P28288 DUXAP9-208ENST00000622815 614 ntBASIC2.57□□□□□ -2
ABCD3P28288 AC099654.14-201ENST00000638599 341 ntBASIC2.57□□□□□ -2
ABCD3P28288 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.57□□□□□ -2
ABCD3P28288 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
ABCD3P28288 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.57□□□□□ -2
ABCD3P28288 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
ABCD3P28288 MIR26A1-201ENST00000362205 77 ntBASIC2.56□□□□□ -2
ABCD3P28288 SNORA80A-201ENST00000363922 136 ntBASIC2.56□□□□□ -2
ABCD3P28288 RN7SKP32-201ENST00000410167 303 ntBASIC2.56□□□□□ -2
ABCD3P28288 RN7SKP158-201ENST00000410453 326 ntBASIC2.56□□□□□ -2
ABCD3P28288 RPL21P111-201ENST00000418453 477 ntBASIC2.56□□□□□ -2
ABCD3P28288 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.56□□□□□ -2
ABCD3P28288 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.56□□□□□ -2
ABCD3P28288 AL353572.1-201ENST00000442490 417 ntBASIC2.56□□□□□ -2
ABCD3P28288 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.56□□□□□ -2
ABCD3P28288 MTND1P17-201ENST00000448961 204 ntBASIC2.56□□□□□ -2
ABCD3P28288 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.56□□□□□ -2
ABCD3P28288 PPP1R2P5-201ENST00000457256 603 ntBASIC2.56□□□□□ -2
ABCD3P28288 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
ABCD3P28288 PTP4A1P4-201ENST00000512479 322 ntBASIC2.56□□□□□ -2
ABCD3P28288 SNORA31.16-201ENST00000516773 139 ntBASIC2.56□□□□□ -2
ABCD3P28288 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.56□□□□□ -2
ABCD3P28288 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.56□□□□□ -2
ABCD3P28288 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.56□□□□□ -2
ABCD3P28288 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms